Detail information of GWHGAAEX003610/evm.TU.scaffold_139.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268317208|ref|YP_003290927.1|3.00E-79silent information regulator protein Sir2 [Rhodothermus marinus DSM 4252]
KOGKOG26833.00E-172Sirtuin 4 and related class II sirtuins (SIR2 family)
nrgi|743816653|ref|XP_010930702.1|0PREDICTED: NAD-dependent protein deacetylase SRT2 isoform X1 [Elaeis guineensis]
Swissprottr|Q94AQ6|SIR4_ARATH2.00E-175NAD-dependent protein deacetylase SRT2 {ECO:0000255|HAMAP-Rule:MF_03161} (Precursor)
trEMBLtr|A0A061DJX4|A0A061DJX4_THECC0NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_03161}
TAIRAT5G092303.00E-172sirtuin 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135425278454170-
Transcript Sequence

Network for GWHGAAEX003610

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02146.16SIR21003152.90E-41
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11414SIRT4, SIR2L4 Metabolic pathways map01100
Nicotinate and nicotinamide metabolismmap00760

Gene Ontology

GO term OntologyName
GO:0070403Molecular FunctionNAD+ binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.870
SRR2545915Juvenile tuber6.320
SRP108465SRR5643513five period of Gastrodia elata28.530
SRR5643514five period of Gastrodia elata36.070
SRR5643515five period of Gastrodia elata30.450
SRR5643524five period of Gastrodia elata35.310
SRR5643525five period of Gastrodia elata46.320
SRR5643528five period of Gastrodia elata35.980
SRR5643658five period of Gastrodia elata53.740
SRR5643659five period of Gastrodia elata19.690
SRR5643660five period of Gastrodia elata16.770
SRR5643661five period of Gastrodia elata20.920
SRR5643662five period of Gastrodia elata17.460
SRR5643663five period of Gastrodia elata21.490
SRR5643664five period of Gastrodia elata14.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.190
SRR6049655Rhizomagastrodiae_C368-T10_good_111.850
SRR6049656Rhizomagastrodiae_C368-T07_good_124.090
SRR6049657Rhizomagastrodiae_C368-T07_good_118.130
SRR6049658Rhizomagastrodiae_C368-T04_good_117.460
SRR6049659Rhizomagastrodiae_C368-T04_good_116.990
SRR6049660Rhizomagastrodiae_C368-T01_good_120.550
SRR6049661Rhizomagastrodiae_C368-T04_good_119.120
SRR6049662Rhizomagastrodiae_C368-T01_good_126.610
SRR6049663Rhizomagastrodiae_C368-T01_good_119.200
SRR6049664Rhizomagastrodiae_C368-T10_good_123.500
SRR6049665Rhizomagastrodiae_C368-T10_good_123.500
SRP279888GastroGastrodia elata tuber 15.02
JuvenJuvenile tuber18.81
Mother_GastroMother tuber of Gastrodia elata 19.65
Mother_JuvenMother tuber of Juvenile 15.74