Detail information of GWHGAAEX003613/evm.TU.scaffold_139.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743764655|ref|XP_010912536.1|1.55E-51PREDICTED: LOW QUALITY PROTEIN: zinc-finger homeodomain protein 2-like [Elaeis guineensis]
Swissprottr|Q9SB61|ZHD2_ARATH3.00E-47Zinc-finger homeodomain protein 2
trEMBLtr|U5DDM4|U5DDM4_AMBTC6.00E-51Uncharacterized protein {ECO:0000313|EMBL:ERN20649.1}
TAIRAT4G246601.00E-46homeobox protein 22

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135503000504058-
Transcript Sequence

Network for GWHGAAEX003613

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.11ZF-HD_dimer21678.30E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.340
SRR2545915Juvenile tuber30.480
SRP108465SRR5643513five period of Gastrodia elata20.590
SRR5643514five period of Gastrodia elata17.740
SRR5643515five period of Gastrodia elata17.390
SRR5643524five period of Gastrodia elata13.620
SRR5643525five period of Gastrodia elata8.080
SRR5643528five period of Gastrodia elata3.890
SRR5643658five period of Gastrodia elata4.720
SRR5643659five period of Gastrodia elata67.530
SRR5643660five period of Gastrodia elata61.860
SRR5643661five period of Gastrodia elata75.630
SRR5643662five period of Gastrodia elata56.240
SRR5643663five period of Gastrodia elata42.650
SRR5643664five period of Gastrodia elata44.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.090
SRR6049655Rhizomagastrodiae_C368-T10_good_123.430
SRR6049656Rhizomagastrodiae_C368-T07_good_146.190
SRR6049657Rhizomagastrodiae_C368-T07_good_128.970
SRR6049658Rhizomagastrodiae_C368-T04_good_144.320
SRR6049659Rhizomagastrodiae_C368-T04_good_128.660
SRR6049660Rhizomagastrodiae_C368-T01_good_125.090
SRR6049661Rhizomagastrodiae_C368-T04_good_152.780
SRR6049662Rhizomagastrodiae_C368-T01_good_133.120
SRR6049663Rhizomagastrodiae_C368-T01_good_134.620
SRR6049664Rhizomagastrodiae_C368-T10_good_124.410
SRR6049665Rhizomagastrodiae_C368-T10_good_124.410
SRP279888GastroGastrodia elata tuber 53.11
JuvenJuvenile tuber81.93
Mother_GastroMother tuber of Gastrodia elata 23.26
Mother_JuvenMother tuber of Juvenile 26.27