Detail information of GWHGAAEX003618/evm.TU.scaffold_139.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|150008082|ref|YP_001302825.1|1.00E-37multidrug ABC transporter ATPase [Parabacteroides distasonis ATCC 8503]
KOGKOG00610Transporter, ABC superfamily (Breast cancer resistance protein)
nrgi|695072777|ref|XP_009383524.1|0PREDICTED: ABC transporter G family member 25-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q84TH5|AB25G_ARATH0ABC transporter G family member 25
trEMBLtr|M0TA44|M0TA44_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P25480_001}
TAIRAT1G719600ATP-binding casette family G25

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135639112643673+
Transcript Sequence

Network for GWHGAAEX003618

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran712121.00E-22
PF01061.23ABC2_membrane3615676.60E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016887Molecular FunctionATPase activity
GO:0005524Molecular FunctionATP binding
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.250
SRR2545915Juvenile tuber3.890
SRP108465SRR5643513five period of Gastrodia elata12.060
SRR5643514five period of Gastrodia elata22.200
SRR5643515five period of Gastrodia elata16.520
SRR5643524five period of Gastrodia elata13.330
SRR5643525five period of Gastrodia elata437.320
SRR5643528five period of Gastrodia elata344.850
SRR5643658five period of Gastrodia elata369.740
SRR5643659five period of Gastrodia elata10.750
SRR5643660five period of Gastrodia elata6.420
SRR5643661five period of Gastrodia elata13.510
SRR5643662five period of Gastrodia elata21.440
SRR5643663five period of Gastrodia elata14.450
SRR5643664five period of Gastrodia elata24.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.200
SRR6049655Rhizomagastrodiae_C368-T10_good_14.000
SRR6049656Rhizomagastrodiae_C368-T07_good_19.190
SRR6049657Rhizomagastrodiae_C368-T07_good_18.910
SRR6049658Rhizomagastrodiae_C368-T04_good_114.630
SRR6049659Rhizomagastrodiae_C368-T04_good_115.160
SRR6049660Rhizomagastrodiae_C368-T01_good_116.900
SRR6049661Rhizomagastrodiae_C368-T04_good_117.230
SRR6049662Rhizomagastrodiae_C368-T01_good_129.830
SRR6049663Rhizomagastrodiae_C368-T01_good_137.840
SRR6049664Rhizomagastrodiae_C368-T10_good_18.380
SRR6049665Rhizomagastrodiae_C368-T10_good_18.380
SRP279888GastroGastrodia elata tuber 21.49
JuvenJuvenile tuber2.86
Mother_GastroMother tuber of Gastrodia elata 61.69
Mother_JuvenMother tuber of Juvenile 7.98