Gene detail

Detail information of GWHGAAEX003619/evm.TU.scaffold_139.32

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743764605\|ref\|XP_010912508.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Elaeis guineensis]
Swissprot	tr\|Q8W486\|Y1491_ARATH	2.00E-75	Uncharacterized protein At1g04910
trEMBL	tr\|M0RIM4\|M0RIM4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr10P15990_001}
TAIR	AT1G35510	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000135	646556	712744	-

Transcript Sequence
>GWHTAAEX003619 GCTGATTTTTATAGTATATTTAAACATTCAAAGTGAATTTTAAGACAGCAAGAATAAGCTAAAAAAACATTTTCGTTACCCTCAAATTTTCTAGATTACTATCTTTATTTTTGTCTTTCAAAAATTAAAAAATTATGTGAATTTTAAGTCAGCAGGATTCTTAAGAGAAGACAGCTTCATTAACTTCGATCACCGTTCCAATAACTTCAATCACAGCTCGCATTAACTAACTGCTTCAAAAGGTTCCCAAAAGGAAAATGCGGCCATTCTTTACCGCTTCTCCCCCGCCAATTGCTGGCGTCTTTTCAGGCTGCCTTTCTTCTGCCATTCTTTCCCTCGCCGCTCTCCCGCTCCTCTCCCGAAATCGGTAAGAAGTTCGGGCTCAAATGAGCGCCCTGCTGGGGGGAATTGCCAGATCTGAATGGCAGTGCCAATGGCGTCTGCGATGACGAGGAAGAAGTTGAGCGCTGGGAATGGGGTCGAGCGGTGTCTATACGGGACACTTGCGGCGGTGCTCCGGCGAAGGGGATGGGTGCTGGCTGCGCCTCTTCTATACGTGACGGCGATGCTTCTTCTTAGTTGGGGCCTCCATGGAATGCAGGCAGGGGTCAGGATGGTGATCCTTCACCGGAAGCCGCCTGGATCGGTTTACCGGAGCCCTCAGGTGTACAAAAAGCTCTTTCCCTTCATGCAAGCTAATACCAATCGCACCAATGCGATGGAAACAGCCTGGAATCTTAAAGCAAATCATAGATGGAAGCCTTGTTTCAGAAATAAATTGTCTCAAACAGGACTTCCACCATCAAATGGTTTTCTACTGATTGAAGCAAATGGAGGCCTGAACCAACAACGTCTTTCGATATGCGATGCAGTAGCAGTTGCTGGGATATTAAATGCTACTCTTGTCATCCCTTTTTTCCATTTAAATAGTGTTTGGCGTGATTCAAGCAAGTTTGGGGATATCTTTGATGAAGACCACTTCATTGAAACTCTAAGAGATCATGTCAGAGTGGTCAGAGAACTTCCTGAAGAAATGCTGGAGCGCTTTGACCATAATATAAGTAGCATAGTTAACATGAGGACAAAGGCACTATCATCAAAAACATATTACTTGCAGAAAGTTCTTCCCATGCTGTTGGAGTTGGGTGCTGTTCGGATTGCACCTTTTTCAAATAGATTGGCTCAAACTGTTCCATCTAGCATACAGGCATTGAGATGTCTATCAAACTTTGAGGCGTTGCGATTTTCTGAACCAATACGAGCTCTTGCTAAAAAATTGGTCCAGCATATGGTGACAAATAGTTCAGCAAGTGGTGGAAAGTATATCTCAGTTCATCTTCGATTTGAGGCGGATATGTTGGCATTCTCATGTTGCACTTATGATGGCGGTCATAAAGAAAAAGAAGAAATGGATAAAGCTCGTGAAAAGAGTTGGAGGGGGAAGTTTAAAAGGCCAGGTAGAAAAATCAACTCTGAGAAGAATCGGAGGGATGGAAAGTGCCCCTTGACTCCGTTAGAGGTTGGAATGATGCTTCGTGGCATGGGATTTGATAACATGACCTCAATCTATGTTGCTTCTGGAATAATTTATAAGCCTGAAAAGTATATGGAACCACTACGTCAATTATTTCCCCTTTTGGAAACAAAGGAAACTCTTGCTTCATCAGAAGAGCTTGCCCCATTTCAGGGTTACTCATCACGACTGGCTGCACTGGACTACACTGTTTGTGCTCAAAGTGAAGTGTTTCTTACCACTCAAGGAGGAAACTTTCCCCACTTCTTGATCGGGGATCGTCGCTTTTTTTATGGAGGCCATTCCAAGACCATCAAACCTGACAAGAGACGATTAGTTTTATCTTTGGATAACCCCAACATCAGATGGGATGAGTTCAAGCGCAACATGCAGGAAATTCTCCATAACAGCGATATGAAGGGTGCTGAACTGCGCAAGCCCAATGCATCACTGTACATGTTTCCCATGCCTGACTGCATGTGTCCACACTCATAATCACCCACCCTCTTTTGTGATTTTCCAATGGCCTCATAAGTTCTCTCAACTCGAACTCATTCAATTATTTTTTTTATTCTTTACATTCTGTTAATGCAATCCAGTTAAAGTTAGAGCATCATTTAGTCCCTATTCTACATGTACGAAGAACAACCTGAATGATTTGTTGTAATGTAGTATGTTAGTCTTACATCAAAGTCTTATGCCAAGTTTTGTAAGTAAACACATTTTAAAATGAATGGAGAATTTTTATACCTTAATGGTTCAATTTTGGGGAATGAGATTCTTTTTATCTTGAACTTGTATTACTAAGAATTTGAGTATTTTCTTGTTGGAAGAATTGCACAAGTGTCACTGAAATCTGTCTTTTTTGTAAAAGTAAACAAATTTATAACGAAGAATTATTGGATTCGTGTATTTGCACGTTGCTGTGCAATCAATATATTTTGACGATTTAGTGAGCAAAGAAAAGGGGATACTTGGCTTTTTTTTGTGTGCAAATAAACAAATTTGGGTACTGCTATATGAGAATGTTTCCCACATTGTTTAGAAGCAAGTAAAAAATTCTGGCGATTGATTTGTGGAACCTTCCTTTGACGTATCAACTTTTCCAACTTGGCTTGACTTCAGATTTGAATCCCTTTACCTATCGACTTAGCTATGTTGTGTAGGACTGAATGTGGGCCAACAAAGAAGAAACTTATCAATAAATTAAGTGTTACATATATGAAGATATTAAGGTGGATGAGTGGATAAAATCAAAAAGATTGAATGAGAAATGAGTT

Network for GWHGAAEX003619

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	131	460	1.00E-75

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.830
SRP064423	SRR2545915	Juvenile tuber	3.090
SRP108465	SRR5643513	five period of Gastrodia elata	12.500
	SRR5643514	five period of Gastrodia elata	12.260
	SRR5643515	five period of Gastrodia elata	12.400
	SRR5643524	five period of Gastrodia elata	11.780
	SRR5643525	five period of Gastrodia elata	13.040
	SRR5643528	five period of Gastrodia elata	17.650
	SRR5643658	five period of Gastrodia elata	14.130
	SRR5643659	five period of Gastrodia elata	9.110
	SRR5643660	five period of Gastrodia elata	9.220
	SRR5643661	five period of Gastrodia elata	3.270
	SRR5643662	five period of Gastrodia elata	10.930
	SRR5643663	five period of Gastrodia elata	9.700
	SRR5643664	five period of Gastrodia elata	11.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.640
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.930
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.590
SRP279888	Gastro	Gastrodia elata tuber	4.04
	Juven	Juvenile tuber	9.31
	Mother_Gastro	Mother tuber of Gastrodia elata	6.30
	Mother_Juven	Mother tuber of Juvenile	11.56