Detail information of GWHGAAEX003623/CADD00326.2.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315832|ref|YP_003289551.1|9.00E-08class I and II aminotransferase [Rhodothermus marinus DSM 4252]
KOGKOG02576.00E-15Kynurenine aminotransferase, glutamine transaminase K
nrgi|470132654|ref|XP_004302193.1|4.00E-20PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Fragaria vesca subsp. vesca]
Swissprottr|E9L7A5|PAT_PETHY2.00E-19Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase (Precursor)
trEMBLtr|M5WP84|M5WP84_PRUPE2.00E-20Uncharacterized protein {ECO:0000313|EMBL:EMJ08630.1}
TAIRAT2G222506.00E-15aspartate aminotransferase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135830491841549-
Transcript Sequence

Network for GWHGAAEX003623

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15849PAT, AAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Biosynthesis of amino acidsmap01230
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Isoquinoline alkaloid biosynthesismap00950

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.870
SRR2545915Juvenile tuber19.300
SRP108465SRR5643513five period of Gastrodia elata36.680
SRR5643514five period of Gastrodia elata44.660
SRR5643515five period of Gastrodia elata42.970
SRR5643524five period of Gastrodia elata44.880
SRR5643525five period of Gastrodia elata34.090
SRR5643528five period of Gastrodia elata49.140
SRR5643658five period of Gastrodia elata35.600
SRR5643659five period of Gastrodia elata29.130
SRR5643660five period of Gastrodia elata22.690
SRR5643661five period of Gastrodia elata25.140
SRR5643662five period of Gastrodia elata27.510
SRR5643663five period of Gastrodia elata28.980
SRR5643664five period of Gastrodia elata25.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.150
SRR6049655Rhizomagastrodiae_C368-T10_good_149.510
SRR6049656Rhizomagastrodiae_C368-T07_good_144.340
SRR6049657Rhizomagastrodiae_C368-T07_good_126.910
SRR6049658Rhizomagastrodiae_C368-T04_good_124.700
SRR6049659Rhizomagastrodiae_C368-T04_good_123.770
SRR6049660Rhizomagastrodiae_C368-T01_good_132.210
SRR6049661Rhizomagastrodiae_C368-T04_good_135.450
SRR6049662Rhizomagastrodiae_C368-T01_good_161.760
SRR6049663Rhizomagastrodiae_C368-T01_good_145.280
SRR6049664Rhizomagastrodiae_C368-T10_good_144.130
SRR6049665Rhizomagastrodiae_C368-T10_good_144.130
SRP279888GastroGastrodia elata tuber 25.93
JuvenJuvenile tuber30.11
Mother_GastroMother tuber of Gastrodia elata 28.16
Mother_JuvenMother tuber of Juvenile 32.17