Detail information of GWHGAAEX003626/evm.TU.scaffold_139.37
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256390603|ref|YP_003112167.1| | 2.00E-23 | serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|672116670|ref|XP_008781505.1| | 0 | PREDICTED: serine/threonine-protein kinase SAPK7 [Phoenix dactylifera] |
| Swissprot | tr|Q7XQP4|SAPK7_ORYSJ | 0 | Serine/threonine-protein kinase SAPK7 |
| trEMBL | tr|K3Y7A2|K3Y7A2_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si010093m} |
| TAIR | AT5G63650 | 0 | SNF1-related protein kinase 2.5 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000135 | 854139 | 859307 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003626
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 4 | 260 | 1.30E-70 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_OST1L |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14498 | SNRK2 | MAPK signaling pathway - plant | map04016 |
| Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.540 |
| SRR2545915 | Juvenile tuber | 38.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 25.740 |
| SRR5643514 | five period of Gastrodia elata | 48.080 | |
| SRR5643515 | five period of Gastrodia elata | 46.690 | |
| SRR5643524 | five period of Gastrodia elata | 45.410 | |
| SRR5643525 | five period of Gastrodia elata | 27.230 | |
| SRR5643528 | five period of Gastrodia elata | 44.980 | |
| SRR5643658 | five period of Gastrodia elata | 36.410 | |
| SRR5643659 | five period of Gastrodia elata | 65.000 | |
| SRR5643660 | five period of Gastrodia elata | 80.670 | |
| SRR5643661 | five period of Gastrodia elata | 72.770 | |
| SRR5643662 | five period of Gastrodia elata | 103.070 | |
| SRR5643663 | five period of Gastrodia elata | 78.380 | |
| SRR5643664 | five period of Gastrodia elata | 73.630 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 39.220 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 44.560 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.580 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.080 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 33.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 35.340 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 30.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.770 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.300 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 41.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 38.970 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 38.970 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 51.79 |
| Juven | Juvenile tuber | 27.76 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 41.13 | |
| Mother_Juven | Mother tuber of Juvenile | 38.02 |