Detail information of GWHGAAEX003627/evm.TU.scaffold_139.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672116668|ref|XP_008781504.1|1.09E-133PREDICTED: uncharacterized protein LOC103701275 [Phoenix dactylifera]
trEMBLtr|M0T6J5|M0T6J5_MUSAM5.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P12970_001}
TAIRAT1G097103.00E-48Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135876843902814-
Transcript Sequence

Network for GWHGAAEX003627

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding2012451.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.660
SRR2545915Juvenile tuber30.700
SRP108465SRR5643513five period of Gastrodia elata25.070
SRR5643514five period of Gastrodia elata24.550
SRR5643515five period of Gastrodia elata20.150
SRR5643524five period of Gastrodia elata20.530
SRR5643525five period of Gastrodia elata30.310
SRR5643528five period of Gastrodia elata24.910
SRR5643658five period of Gastrodia elata31.780
SRR5643659five period of Gastrodia elata25.450
SRR5643660five period of Gastrodia elata28.690
SRR5643661five period of Gastrodia elata23.160
SRR5643662five period of Gastrodia elata27.810
SRR5643663five period of Gastrodia elata32.040
SRR5643664five period of Gastrodia elata30.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.380
SRR6049655Rhizomagastrodiae_C368-T10_good_130.800
SRR6049656Rhizomagastrodiae_C368-T07_good_130.060
SRR6049657Rhizomagastrodiae_C368-T07_good_137.810
SRR6049658Rhizomagastrodiae_C368-T04_good_132.810
SRR6049659Rhizomagastrodiae_C368-T04_good_133.860
SRR6049660Rhizomagastrodiae_C368-T01_good_130.850
SRR6049661Rhizomagastrodiae_C368-T04_good_130.900
SRR6049662Rhizomagastrodiae_C368-T01_good_123.900
SRR6049663Rhizomagastrodiae_C368-T01_good_125.350
SRR6049664Rhizomagastrodiae_C368-T10_good_126.730
SRR6049665Rhizomagastrodiae_C368-T10_good_126.730
SRP279888GastroGastrodia elata tuber 30.42
JuvenJuvenile tuber43.83
Mother_GastroMother tuber of Gastrodia elata 18.88
Mother_JuvenMother tuber of Juvenile 32.19