Detail information of GWHGAAEX003629/evm.TU.scaffold_139.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|328951661|ref|YP_004368996.1|4.00E-17signal transduction protein with CBS domains [Marinithermus hydrothermalis DSM 14884]
nrgi|672116662|ref|XP_008781501.1|2.86E-155PREDICTED: CBS domain-containing protein CBSCBSPB3 [Phoenix dactylifera]
Swissprottr|Q9LF97|Y3295_ARATH1.00E-125CBS domain-containing protein CBSCBSPB3
trEMBLtr|M0S653|M0S653_MUSAM4.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P08120_001}
trEMBLtr|M0S653|M0S653_MUSAM2.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P08120_001}
TAIRAT3G529504.00E-125CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000135930304944608+
Transcript Sequence

Network for GWHGAAEX003629

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00571.27CBS13601.80E-06
PF00571.27CBS731154.60E-06
PF00564.23PB11962763.20E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.740
SRR2545915Juvenile tuber42.630
SRP108465SRR5643513five period of Gastrodia elata15.830
SRR5643514five period of Gastrodia elata18.440
SRR5643515five period of Gastrodia elata14.290
SRR5643524five period of Gastrodia elata17.410
SRR5643525five period of Gastrodia elata18.630
SRR5643528five period of Gastrodia elata23.410
SRR5643658five period of Gastrodia elata24.350
SRR5643659five period of Gastrodia elata13.140
SRR5643660five period of Gastrodia elata18.060
SRR5643661five period of Gastrodia elata15.410
SRR5643662five period of Gastrodia elata15.200
SRR5643663five period of Gastrodia elata15.590
SRR5643664five period of Gastrodia elata19.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.300
SRR6049655Rhizomagastrodiae_C368-T10_good_112.830
SRR6049656Rhizomagastrodiae_C368-T07_good_121.300
SRR6049657Rhizomagastrodiae_C368-T07_good_125.670
SRR6049658Rhizomagastrodiae_C368-T04_good_131.640
SRR6049659Rhizomagastrodiae_C368-T04_good_136.890
SRR6049660Rhizomagastrodiae_C368-T01_good_126.710
SRR6049661Rhizomagastrodiae_C368-T04_good_127.430
SRR6049662Rhizomagastrodiae_C368-T01_good_117.540
SRR6049663Rhizomagastrodiae_C368-T01_good_123.110
SRR6049664Rhizomagastrodiae_C368-T10_good_118.140
SRR6049665Rhizomagastrodiae_C368-T10_good_118.140
SRP279888GastroGastrodia elata tuber 31.92
JuvenJuvenile tuber15.17
Mother_GastroMother tuber of Gastrodia elata 31.20
Mother_JuvenMother tuber of Juvenile 16.81