Detail information of GWHGAAEX003634/evm.TU.scaffold_139.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44144.00E-89COP9 signalosome, subunit CSN8
nrgi|743764482|ref|XP_010912448.1|5.25E-105PREDICTED: COP9 signalosome complex subunit 8 isoform X1 [Elaeis guineensis]
Swissprottr|P43255|CSN8_ARATH1.00E-89COP9 signalosome complex subunit 8
trEMBLtr|M0S9P1|M0S9P1_MUSAM9.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P20500_001}
TAIRAT4G141104.00E-89COP9 signalosome, subunit CSN8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013510212301035541-
Transcript Sequence

Network for GWHGAAEX003634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10075.8CSN8_PSD8_EIF3K391714.30E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.840
SRR2545915Juvenile tuber38.760
SRP108465SRR5643513five period of Gastrodia elata53.240
SRR5643514five period of Gastrodia elata52.710
SRR5643515five period of Gastrodia elata51.190
SRR5643524five period of Gastrodia elata57.170
SRR5643525five period of Gastrodia elata81.220
SRR5643528five period of Gastrodia elata80.030
SRR5643658five period of Gastrodia elata78.310
SRR5643659five period of Gastrodia elata41.800
SRR5643660five period of Gastrodia elata56.050
SRR5643661five period of Gastrodia elata52.590
SRR5643662five period of Gastrodia elata57.180
SRR5643663five period of Gastrodia elata48.460
SRR5643664five period of Gastrodia elata62.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.340
SRR6049655Rhizomagastrodiae_C368-T10_good_162.600
SRR6049656Rhizomagastrodiae_C368-T07_good_150.620
SRR6049657Rhizomagastrodiae_C368-T07_good_147.240
SRR6049658Rhizomagastrodiae_C368-T04_good_142.820
SRR6049659Rhizomagastrodiae_C368-T04_good_142.800
SRR6049660Rhizomagastrodiae_C368-T01_good_145.620
SRR6049661Rhizomagastrodiae_C368-T04_good_144.360
SRR6049662Rhizomagastrodiae_C368-T01_good_142.250
SRR6049663Rhizomagastrodiae_C368-T01_good_143.520
SRR6049664Rhizomagastrodiae_C368-T10_good_152.340
SRR6049665Rhizomagastrodiae_C368-T10_good_152.340
SRP279888GastroGastrodia elata tuber 72.97
JuvenJuvenile tuber67.62
Mother_GastroMother tuber of Gastrodia elata 62.11
Mother_JuvenMother tuber of Juvenile 86.44