Detail information of GWHGAAEX003636/evm.TU.scaffold_139.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720015811|ref|XP_010260958.1|3.93E-140PREDICTED: uncharacterized protein LOC104599908 [Nelumbo nucifera]
trEMBLtr|B9H7S5|B9H7S5_POPTR8.00E-129Uncharacterized protein {ECO:0000313|EMBL:EEE93695.1}
TAIRAT1G744504.00E-116Protein of unknown function (DUF793)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013510590641060200+
Transcript Sequence

Network for GWHGAAEX003636

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05633.10BPS1203747.10E-128
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.170
SRR2545915Juvenile tuber0.820
SRP108465SRR5643513five period of Gastrodia elata3.060
SRR5643514five period of Gastrodia elata8.540
SRR5643515five period of Gastrodia elata9.920
SRR5643524five period of Gastrodia elata6.270
SRR5643525five period of Gastrodia elata1.730
SRR5643528five period of Gastrodia elata3.090
SRR5643658five period of Gastrodia elata2.450
SRR5643659five period of Gastrodia elata3.560
SRR5643660five period of Gastrodia elata4.020
SRR5643661five period of Gastrodia elata4.020
SRR5643662five period of Gastrodia elata10.990
SRR5643663five period of Gastrodia elata2.920
SRR5643664five period of Gastrodia elata2.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.500
SRR6049655Rhizomagastrodiae_C368-T10_good_117.260
SRR6049656Rhizomagastrodiae_C368-T07_good_112.440
SRR6049657Rhizomagastrodiae_C368-T07_good_14.330
SRR6049658Rhizomagastrodiae_C368-T04_good_18.610
SRR6049659Rhizomagastrodiae_C368-T04_good_18.310
SRR6049660Rhizomagastrodiae_C368-T01_good_15.070
SRR6049661Rhizomagastrodiae_C368-T04_good_15.950
SRR6049662Rhizomagastrodiae_C368-T01_good_116.890
SRR6049663Rhizomagastrodiae_C368-T01_good_18.580
SRR6049664Rhizomagastrodiae_C368-T10_good_131.220
SRR6049665Rhizomagastrodiae_C368-T10_good_131.220
SRP279888GastroGastrodia elata tuber 1.48
JuvenJuvenile tuber1.42
Mother_GastroMother tuber of Gastrodia elata 4.25
Mother_JuvenMother tuber of Juvenile 3.14