Detail information of GWHGAAEX003653/evm.TU.scaffold_139.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672128798|ref|XP_008787890.1|2.55E-94PREDICTED: protein Barley B recombinant-like [Phoenix dactylifera]
Swissprottr|P0DH89|BBRB_ORYSJ1.00E-67Barley B recombinant-like protein B
trEMBLtr|W9SG76|W9SG76_9ROSA3.00E-81Uncharacterized protein {ECO:0000313|EMBL:EXC05028.1}
TAIRAT2G019306.00E-60basic pentacysteine1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013512067901208649+
Transcript Sequence

Network for GWHGAAEX003653

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06217.11GAGA_bind13171.00E-82
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBBR-BPC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.320
SRR2545915Juvenile tuber18.910
SRP108465SRR5643513five period of Gastrodia elata26.060
SRR5643514five period of Gastrodia elata22.510
SRR5643515five period of Gastrodia elata20.650
SRR5643524five period of Gastrodia elata22.780
SRR5643525five period of Gastrodia elata16.550
SRR5643528five period of Gastrodia elata13.040
SRR5643658five period of Gastrodia elata14.320
SRR5643659five period of Gastrodia elata18.470
SRR5643660five period of Gastrodia elata19.630
SRR5643661five period of Gastrodia elata20.240
SRR5643662five period of Gastrodia elata17.100
SRR5643663five period of Gastrodia elata16.650
SRR5643664five period of Gastrodia elata15.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.550
SRR6049655Rhizomagastrodiae_C368-T10_good_114.310
SRR6049656Rhizomagastrodiae_C368-T07_good_122.160
SRR6049657Rhizomagastrodiae_C368-T07_good_121.470
SRR6049658Rhizomagastrodiae_C368-T04_good_117.440
SRR6049659Rhizomagastrodiae_C368-T04_good_113.860
SRR6049660Rhizomagastrodiae_C368-T01_good_119.790
SRR6049661Rhizomagastrodiae_C368-T04_good_124.290
SRR6049662Rhizomagastrodiae_C368-T01_good_125.950
SRR6049663Rhizomagastrodiae_C368-T01_good_121.540
SRR6049664Rhizomagastrodiae_C368-T10_good_120.440
SRR6049665Rhizomagastrodiae_C368-T10_good_120.440
SRP279888GastroGastrodia elata tuber 19.39
JuvenJuvenile tuber22.61
Mother_GastroMother tuber of Gastrodia elata 40.25
Mother_JuvenMother tuber of Juvenile 29.00