Detail information of GWHGAAEX003655/evm.TU.scaffold_139.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383763408|ref|YP_005442390.1| | 8.00E-100 | potassium transport protein Kup [Caldilinea aerophila DSM 14535 = NBRC 104270] |
| nr | gi|672136312|ref|XP_008791850.1| | 0 | PREDICTED: probable potassium transporter 17 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q67UC7|HAK17_ORYSJ | 0 | Probable potassium transporter 17 |
| trEMBL | tr|M0TGX6|M0TGX6_MUSAM | 0 | Potassium transporter {ECO:0000256|RuleBase:RU321113} |
| TAIR | AT5G14880 | 4.00E-158 | Potassium transporter family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000135 | 1232796 | 1242444 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003655
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02705.15 | K_trans | 45 | 609 | 1.20E-186 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0071805 | Biological Process | potassium ion transmembrane transport |
| GO:0015079 | Molecular Function | potassium ion transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.110 |
| SRR2545915 | Juvenile tuber | 1.120 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.930 |
| SRR5643514 | five period of Gastrodia elata | 8.280 | |
| SRR5643515 | five period of Gastrodia elata | 3.430 | |
| SRR5643524 | five period of Gastrodia elata | 5.150 | |
| SRR5643525 | five period of Gastrodia elata | 96.390 | |
| SRR5643528 | five period of Gastrodia elata | 42.300 | |
| SRR5643658 | five period of Gastrodia elata | 198.650 | |
| SRR5643659 | five period of Gastrodia elata | 1.810 | |
| SRR5643660 | five period of Gastrodia elata | 1.240 | |
| SRR5643661 | five period of Gastrodia elata | 1.720 | |
| SRR5643662 | five period of Gastrodia elata | 3.070 | |
| SRR5643663 | five period of Gastrodia elata | 6.310 | |
| SRR5643664 | five period of Gastrodia elata | 6.270 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.440 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 11.290 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.970 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.380 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.940 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.940 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.44 |
| Juven | Juvenile tuber | 15.64 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.17 | |
| Mother_Juven | Mother tuber of Juvenile | 5.14 |