Detail information of GWHGAAEX003661/evm.TU.scaffold_139.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695044604|ref|XP_009410061.1|3.77E-104PREDICTED: probable signal peptidase complex subunit 2 [Musa acuminata subsp. malaccensis]
Swissprottr|P58684|SPCS2_ARATH1.00E-92Probable signal peptidase complex subunit 2
trEMBLtr|M0TIP1|M0TIP1_MUSAM2.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P18540_001}
TAIRAT2G399604.00E-35Microsomal signal peptidase 25 kDa subunit (SPC25)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013513354931344259+
Transcript Sequence

Network for GWHGAAEX003661

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06703.10SPC25191784.80E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12947SPCS2, SPC2 Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006465Biological Processsignal peptide processing
GO:0008233Molecular Functionpeptidase activity
GO:0005787Cellular Componentsignal peptidase complex
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms189.580
SRR2545915Juvenile tuber214.380
SRP108465SRR5643513five period of Gastrodia elata132.930
SRR5643514five period of Gastrodia elata141.230
SRR5643515five period of Gastrodia elata131.920
SRR5643524five period of Gastrodia elata129.270
SRR5643525five period of Gastrodia elata119.890
SRR5643528five period of Gastrodia elata129.230
SRR5643658five period of Gastrodia elata101.890
SRR5643659five period of Gastrodia elata127.220
SRR5643660five period of Gastrodia elata134.770
SRR5643661five period of Gastrodia elata139.530
SRR5643662five period of Gastrodia elata115.580
SRR5643663five period of Gastrodia elata111.040
SRR5643664five period of Gastrodia elata109.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1138.630
SRR6049655Rhizomagastrodiae_C368-T10_good_1141.070
SRR6049656Rhizomagastrodiae_C368-T07_good_1160.770
SRR6049657Rhizomagastrodiae_C368-T07_good_1112.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1147.270
SRR6049659Rhizomagastrodiae_C368-T04_good_1133.670
SRR6049660Rhizomagastrodiae_C368-T01_good_1136.490
SRR6049661Rhizomagastrodiae_C368-T04_good_1132.870
SRR6049662Rhizomagastrodiae_C368-T01_good_1167.600
SRR6049663Rhizomagastrodiae_C368-T01_good_1161.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1218.680
SRR6049665Rhizomagastrodiae_C368-T10_good_1218.680
SRP279888GastroGastrodia elata tuber 200.60
JuvenJuvenile tuber124.89
Mother_GastroMother tuber of Gastrodia elata 144.95
Mother_JuvenMother tuber of Juvenile 114.53