Detail information of GWHGAAEX003666/evm.TU.scaffold_139.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24012.00E-27Predicted MutS-related protein involved in mismatch repair
nrgi|672145572|ref|XP_008796708.1|4.98E-58PREDICTED: uncharacterized protein LOC103712090 isoform X1 [Phoenix dactylifera]
trEMBLtr|A0A059C8A7|A0A059C8A7_EUCGR5.00E-42Uncharacterized protein {ECO:0000313|EMBL:KCW74597.1}
TAIRAT3G153902.00E-27silencing defective 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013515151741532018-
Transcript Sequence

Network for GWHGAAEX003666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08590.9DUF177118782.90E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.890
SRR2545915Juvenile tuber21.990
SRP108465SRR5643513five period of Gastrodia elata10.170
SRR5643514five period of Gastrodia elata7.870
SRR5643515five period of Gastrodia elata6.040
SRR5643524five period of Gastrodia elata9.680
SRR5643525five period of Gastrodia elata13.950
SRR5643528five period of Gastrodia elata12.780
SRR5643658five period of Gastrodia elata13.470
SRR5643659five period of Gastrodia elata12.400
SRR5643660five period of Gastrodia elata12.520
SRR5643661five period of Gastrodia elata14.790
SRR5643662five period of Gastrodia elata11.740
SRR5643663five period of Gastrodia elata20.000
SRR5643664five period of Gastrodia elata13.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.120
SRR6049655Rhizomagastrodiae_C368-T10_good_114.770
SRR6049656Rhizomagastrodiae_C368-T07_good_111.720
SRR6049657Rhizomagastrodiae_C368-T07_good_117.670
SRR6049658Rhizomagastrodiae_C368-T04_good_116.210
SRR6049659Rhizomagastrodiae_C368-T04_good_122.910
SRR6049660Rhizomagastrodiae_C368-T01_good_113.560
SRR6049661Rhizomagastrodiae_C368-T04_good_117.960
SRR6049662Rhizomagastrodiae_C368-T01_good_19.350
SRR6049663Rhizomagastrodiae_C368-T01_good_114.440
SRR6049664Rhizomagastrodiae_C368-T10_good_113.660
SRR6049665Rhizomagastrodiae_C368-T10_good_113.660
SRP279888GastroGastrodia elata tuber 28.75
JuvenJuvenile tuber24.69
Mother_GastroMother tuber of Gastrodia elata 28.03
Mother_JuvenMother tuber of Juvenile 38.72