Detail information of GWHGAAEX003679/evm.TU.scaffold_139.96
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226229238|ref|YP_002763344.1| | 3.00E-20 | putative protein kinase [Gemmatimonas aurantiaca T-27] |
| KOG | KOG1187 | 3.00E-136 | Serine/threonine protein kinase |
| nr | gi|672204758|ref|XP_008778999.1| | 1.84E-154 | PREDICTED: probable receptor-like protein kinase At5g47070 [Phoenix dactylifera] |
| Swissprot | tr|Q9LFP7|Y5158_ARATH | 5.00E-103 | Probable receptor-like protein kinase At5g15080 |
| trEMBL | tr|F6HNE2|F6HNE2_VITVI | 7.00E-149 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB56161.1} |
| TAIR | AT3G09830 | 3.00E-136 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000135 | 1741115 | 1745144 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003679
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 5 | 240 | 1.50E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.560 |
| SRR2545915 | Juvenile tuber | 10.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.990 |
| SRR5643514 | five period of Gastrodia elata | 12.640 | |
| SRR5643515 | five period of Gastrodia elata | 8.090 | |
| SRR5643524 | five period of Gastrodia elata | 13.370 | |
| SRR5643525 | five period of Gastrodia elata | 19.790 | |
| SRR5643528 | five period of Gastrodia elata | 16.000 | |
| SRR5643658 | five period of Gastrodia elata | 19.380 | |
| SRR5643659 | five period of Gastrodia elata | 4.970 | |
| SRR5643660 | five period of Gastrodia elata | 5.520 | |
| SRR5643661 | five period of Gastrodia elata | 6.360 | |
| SRR5643662 | five period of Gastrodia elata | 6.100 | |
| SRR5643663 | five period of Gastrodia elata | 4.640 | |
| SRR5643664 | five period of Gastrodia elata | 5.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.980 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.930 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 15.140 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.290 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.470 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.620 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.11 |
| Juven | Juvenile tuber | 14.68 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 17.74 | |
| Mother_Juven | Mother tuber of Juvenile | 16.31 |