Detail information of GWHGAAEX003680/evm.TU.scaffold_139.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26053.00E-99OTU (ovarian tumor)-like cysteine protease
nrgi|743835124|ref|XP_010935728.1|8.99E-172PREDICTED: OTU domain-containing protein DDB_G0284757 isoform X1 [Elaeis guineensis]
trEMBLtr|M0S508|M0S508_MUSAM4.00E-155Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P04170_001}
TAIRAT5G042503.00E-99Cysteine proteinases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013517463661756223+
Transcript Sequence

Network for GWHGAAEX003680

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02338.18OTU2083133.80E-12
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyOTU

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.730
SRR2545915Juvenile tuber19.910
SRP108465SRR5643513five period of Gastrodia elata11.850
SRR5643514five period of Gastrodia elata8.110
SRR5643515five period of Gastrodia elata9.590
SRR5643524five period of Gastrodia elata8.250
SRR5643525five period of Gastrodia elata45.140
SRR5643528five period of Gastrodia elata56.100
SRR5643658five period of Gastrodia elata44.220
SRR5643659five period of Gastrodia elata7.140
SRR5643660five period of Gastrodia elata5.200
SRR5643661five period of Gastrodia elata6.000
SRR5643662five period of Gastrodia elata5.550
SRR5643663five period of Gastrodia elata9.060
SRR5643664five period of Gastrodia elata8.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.170
SRR6049655Rhizomagastrodiae_C368-T10_good_111.650
SRR6049656Rhizomagastrodiae_C368-T07_good_110.320
SRR6049657Rhizomagastrodiae_C368-T07_good_111.250
SRR6049658Rhizomagastrodiae_C368-T04_good_113.400
SRR6049659Rhizomagastrodiae_C368-T04_good_115.870
SRR6049660Rhizomagastrodiae_C368-T01_good_112.000
SRR6049661Rhizomagastrodiae_C368-T04_good_110.450
SRR6049662Rhizomagastrodiae_C368-T01_good_110.270
SRR6049663Rhizomagastrodiae_C368-T01_good_111.270
SRR6049664Rhizomagastrodiae_C368-T10_good_111.710
SRR6049665Rhizomagastrodiae_C368-T10_good_111.710
SRP279888GastroGastrodia elata tuber 12.41
JuvenJuvenile tuber8.79
Mother_GastroMother tuber of Gastrodia elata 23.28
Mother_JuvenMother tuber of Juvenile 26.38