Detail information of GWHGAAEX003689/evm.TU.scaffold_139.107


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013520216852021969-
Transcript Sequence

Network for GWHGAAEX003689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05731TIAM1 Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
cAMP signaling pathwaymap04024
Tight junctionmap04530
Regulation of actin cytoskeletonmap04810
Chemokine signaling pathwaymap04062

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.390
SRR2545915Juvenile tuber5.130
SRP108465SRR5643513five period of Gastrodia elata18.320
SRR5643514five period of Gastrodia elata29.020
SRR5643515five period of Gastrodia elata17.800
SRR5643524five period of Gastrodia elata26.510
SRR5643525five period of Gastrodia elata35.270
SRR5643528five period of Gastrodia elata15.980
SRR5643658five period of Gastrodia elata13.150
SRR5643659five period of Gastrodia elata32.150
SRR5643660five period of Gastrodia elata40.660
SRR5643661five period of Gastrodia elata29.170
SRR5643662five period of Gastrodia elata33.770
SRR5643663five period of Gastrodia elata39.070
SRR5643664five period of Gastrodia elata34.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.920
SRR6049655Rhizomagastrodiae_C368-T10_good_164.470
SRR6049656Rhizomagastrodiae_C368-T07_good_137.980
SRR6049657Rhizomagastrodiae_C368-T07_good_140.250
SRR6049658Rhizomagastrodiae_C368-T04_good_126.790
SRR6049659Rhizomagastrodiae_C368-T04_good_128.700
SRR6049660Rhizomagastrodiae_C368-T01_good_147.480
SRR6049661Rhizomagastrodiae_C368-T04_good_140.820
SRR6049662Rhizomagastrodiae_C368-T01_good_144.020
SRR6049663Rhizomagastrodiae_C368-T01_good_153.780
SRR6049664Rhizomagastrodiae_C368-T10_good_161.000
SRR6049665Rhizomagastrodiae_C368-T10_good_161.000
SRP279888GastroGastrodia elata tuber 65.31
JuvenJuvenile tuber119.98
Mother_GastroMother tuber of Gastrodia elata 39.71
Mother_JuvenMother tuber of Juvenile 38.96