Gene detail

Detail information of GWHGAAEX003692/evm.TU.scaffold_139.110

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743776365\|ref\|XP_010918589.1\|	0	PREDICTED: myosin-11-like [Elaeis guineensis]
trEMBL	tr\|A5BTW5\|A5BTW5_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN83583.1}
TAIR	AT1G22060	2.00E-28	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000135	2043618	2081075	-

Transcript Sequence
>GWHTAAEX003692 ATGTTTAGGCTGAGTAAGCACAGGTCGGAGAGAGCGGGGGAGAGGGTGGAATTCAAATTCTCTAATTTGCAGGCTTTTAAGGTTCCAAAAGGATGGGATAAGCTTTATGTTTCTGTTATGTCAATGGAAACTGGAAAGACAATTGCTAAGTCAAGCAAGGCAACAGTACGCAGTGGAACTTGCCAGTGGACGGATAGTTTTTCAGAATCTATATCGTTGTCTCAAAATAGTGGATCAAAAGATCATGAAGAATGCTTCTTCAAATTTATCCTATCCATGGGATCAGCAGGTAAGCCGGGTATCCTAGGAGAGATTGTTTTGAATCTTGCAAGTTATATAGATTCAAATGACTCCAACCCTCTCACCCTGTCATTAAATAAATGCAATTATGGTACGATTTTACAGGTGAAGATTCAGTGCTTCCACCCAAGGACAAGATTCAGAGATTTTAATGCTTTGAAGGCTACAAACTCTCGATTTGAAAGCCCGAATACTAGCAATGGTGACATAGATAATAAATCAGATGCATCTAACACAACAAATAATGAAAGCTTGGGATCACTTTCTAGTCATCTTACCACTGCTACCTTTCTAAATAGGCCTGTAAATCAGGATGCAATTTCCTTGGCATCAGGTTCACATTCTAGTTCTGATTCAACAGAGAATTCTCTGGGAAGGACCAAATATTCTTCTCCAAAATCCAATGTCAATGGCAACTTACATATCAGAAGACAAGATTCAAATGGCTCTCATGCTAGTGCAACCTCCAGTGCTGGCCCTGTTGAAGATCTCTCTAGATCAAATCCATCATCCTTTAATTCGAGGGCTTCTGGGTCTTCCACTCCTCATCAGTGGCAGGAAGCTACCATGCAAGCTGTTCCCCAAGGGTATGCTGCACTGTCTCTTGGGACCTCCGGATCTTCTAAAGAACTACTTGAAGCTGCTGAAGAAACTATTGAAGAACTCCGGGATGAGGCCAAAATGTGGGAAAGACATGCTCAGAAATTGAAGATTGAACTTGAAAAGCTGAAAAAGGATTTCTCCTTCAAAGCAAAACACCAGGCAGAGCTAGATATAGAGCTTTCTGCTACTAATAATGAGCGTGATTCTTTAAAGAGGGAAGTTGATCAACTGAAATTGTCTCTGGACGGTTTCAAGGGAAGTCAGGAAGGCATGGAAAGCTGTAAAACAGAAGGTATACTTCATGCACAACGGCAACTGGAAGAAGAGCTGAAGTTCTTGAGAGAATTCAATGGTACCCTAACAATGCAGCTAAATAAATCTCAGGAAGCAAATCTTGAGCTTGTTGCTATACTTGAAGAACTTGAAGAAACAGTAGAGAAACAGAGATTGGAGTTAGCAAAATTTACTCAAATGACTTCTATATATAGTGAGGAGATGAGAGATCAAACATTAATGGATATTGAGGCAGAGCAGTCAAACAAGCTGTCTGCAAAAGAAGAATCTAGTGTGTTAGTAGAAAGCTTACATAGAGTCCAAAATGCTTTTCGACCCACAGAGATTGTATCGAATCAAGGAGATTCTGATCTAATGCAAGAAATTGAAGATTTAAGAGCTAAAATACAAGAACTTGAGAGGGATTGCACTGAACTTACGGAAGAAAACTTGAACCTCATTTATAAGCTCAAGGATTCAAAGAAGGATGTTGACGATGCAAAAGAGTCTAGTAATGTTTCTTCATTTAATGATTCTAACGGGACTAATTTACTTGATAGTTCTGTATCTGATATTAGCCAGCTTAAATTTCAAATAAGTCAACTAGAAGAGGAGCTTCATAGGAGGGATATGAAAGAAGCTATTAGTACAGAGCTTTTTCAAATGGATGATCTGAAAAAAAAATGTAATGAACTTGTGACTGAACTCCAATATAATAAGAATAATTCTATTGACAAGGAATATTCCGCTGCTGTTACAATGCAGACGGTGGAAATCTTGAAGTCAATTATCAACTTGGGAATGCCAAGAATTCTACATGAAATGGATCAACGACTTCAACTTGCATTAAGCTATGTAAGAAACCTAAATAATGGCCAGGATACTGTTTCAGAAAGTTGCAATGAGATCAGGTCTGATTTTATAGTTTCTAGCAAAACAAATGCAGCAAATCAGGAAGAATTAATAGAGGATATGCTAATGGGTTTTATTAAATTGTGTTCTTCATTACAAGCTAAAGTTGCTGAGTGCAAGGAGCTTTTGCAGATTAAAATGGAAGGTATCATGGAGAAAAAATTGGTCACTGCAACTGATGTACATGTCATTGAAGATGACATTATGGAAGTGCAAAGTAAAGATTTGATAGAAGATCTGAAATTGAGAAATGAGGAGCTTGAAACTGCGTTCTTACTGAAAGAAAAGGAGATTGATGCTTTAGAAACGTCCATGAAGGAATTAGAAGATATAATTTCCAGCATCAAAAGAGAGAAGATTCAGGTGGAGGAAACTTTGGCCGTTGCACAAAGGGAAAACATAGTTGTCTCCAGATACTTGGATGATGTGCGAACTGAGATAGTTCTAAGTAACGTTGCAAAAACTCATGACAAGATGATAGAGAGGAAAATATCAGAACTTGATATAGGCAAACAAGAGCAGGAGCTGGACATATCTGTAATGGAGGTTGAGAATTTGCACTTGTCTCAAAATATTTCTGAATTGGAAGCTCAATTAAGTCACATGACAGATGAGATAGAAGCCAACAGATTGGAAATTAAAGATTACAAGTCTCACATAGAGGATCTCAAGGATGAAATAGCGCAAGAACAAGCAGAGATAAAAAATCTGAAATTTGAACATAGCAAAAAGCTCCAAGAAGTTGAAAAACAATTGTTTGATGCACAAGAGGAATCTGAAGTTCTGAAGAATTCTCACTCAAAATTACAATCTGCAATTGAGAATCTTATTGAGGAATGCAGCTTACTACAGAAACGAATTGAGAATTTTCAGAGGCAAAAATTGGAGATGTGTGAACTAATGTCACATTATGAGCTTGAGTCGGGGGATTTACAAAACAAGATCGTTGAGAATTTAAACAAAATTGAGGTATTAGAAGGAAATATTACTTTGCTACATTGTGATTTTACATTAAAGGAAGAGACTCTTACTTCACAGCTGGAGAGCATACTTCAAGAAAGTAGGGAGCAAGAGCTGAAAATAAGCAAGGTCGATGTCATTTTAAAACACATCAATCATGAACATATGGCTGAAATTGAGAATCTCAAACAAGAAAACCTGCAACTCTCAACACAGGTTTGTTCATTCCTGGATGAACGAGAAAAATTATCATCAAATGCTGTAAAAGAAGATGCTATTTTGCGGTCAGACAAAAATAAACTTGAAGTCAGTTTCCAGGAAGTTCAACTGAAATTGAAGTTGTATGAAACAGAGGTTTATAATTTGACGCAAGAGTCTACCAATAAGGTTGAAGGGCTTGTAAACTTGCTAAATGCATCCAAACAGAGCGAGGAAATGTTGATGTCTGACATTGAACATATGCAGAGAATGACAGAATCTCTTAAATCTAGTGAGTCTACTTTTAGAAGATTGACTAATGAGCTTGAACTAAAGCTAAAAGCTTCTGATTATGAAAACCAGCAATTGAACGAAGATGTGTCTGGTCTAAAAATTCAACTTCTGAAGCTATCACAATTTCAAAATGAAATCTTAAATCTCAAAACTTCTCTTGAAGAGGAAAAATATGAAAGGGAGAAATTGGAAGGTTTATTGCTATCAACATCTGAAGAATGCAATGATTTGAAGGTGGAGAAAATGGCTTTCTCTGATAAGATCTCATATTTGCAGAAAGCTTTACATGATGCTGAAGATGATAGACGTAGTAAGGTTGCCTTGGAAGAAAAACTTCTGAGGCTTGAGGCTGATCTGACAACAACGGAAGCATCATATGCTCAAGAAGATGGAATCAAGAACGAAATAAACAGCATCAAGAAAGTAAATAATGAGTATTGGCAAAAGATACAAAACCTAGAGGAGGAAAAAAGTGAAATCAAGAGGAAAGCCCAGGCATTGGAGAAAGAACTCGCTCAGAGAAAAATGGAGAGAGTAGAGGAGAAGGTTTCAGTTAAGGTTGAAAATGCGCTGCATGGTAGAATGAAGGGAGCTCAAGTTCAAAAAGAAGCTGCACTTGAATCCAAGATTCATTCACTGCAAACAGAACTTACTGAAGCTTTGGAGGCAAATAACATTTACCAACTTCAAGTTAATGGATTTTTCTCAGAGAAACAGAGAAATAAAACAGAGAACTTTGAGAAAATAGCTTCACTGGAGACTGAACTGAAGGAAATGAGGGAGCGTTACCTCCACATGAGCCTTCAGTATGCTGAAGTTGAAGCCCAGCGTGAAGAGTTAGTCATGCAGCTTAAATCAGTAGCAAAGAAAGAGAAGAAGTGGTTCTCTTAA

Network for GWHGAAEX003692

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10358.8	NT-C2	16	140	4.80E-12

Protein Sequence

>GWHPAAEX003692
MFRLSKHRSERAGERVEFKFSNLQAFKVPKGWDKLYVSVMSMETGKTIAKSSKATVRSGTCQWTDSFSESISLSQNSGSKDHEECFFKFILSMGSAGKPGILGEIVLNLASYIDSNDSNPLTLSLNKCNYGTILQVKIQCFHPRTRFRDFNALKATNSRFESPNTSNGDIDNKSDASNTTNNESLGSLSSHLTTATFLNRPVNQDAISLASGSHSSSDSTENSLGRTKYSSPKSNVNGNLHIRRQDSNGSHASATSSAGPVEDLSRSNPSSFNSRASGSSTPHQWQEATMQAVPQGYAALSLGTSGSSKELLEAAEETIEELRDEAKMWERHAQKLKIELEKLKKDFSFKAKHQAELDIELSATNNERDSLKREVDQLKLSLDGFKGSQEGMESCKTEGILHAQRQLEEELKFLREFNGTLTMQLNKSQEANLELVAILEELEETVEKQRLELAKFTQMTSIYSEEMRDQTLMDIEAEQSNKLSAKEESSVLVESLHRVQNAFRPTEIVSNQGDSDLMQEIEDLRAKIQELERDCTELTEENLNLIYKLKDSKKDVDDAKESSNVSSFNDSNGTNLLDSSVSDISQLKFQISQLEEELHRRDMKEAISTELFQMDDLKKKCNELVTELQYNKNNSIDKEYSAAVTMQTVEILKSIINLGMPRILHEMDQRLQLALSYVRNLNNGQDTVSESCNEIRSDFIVSSKTNAANQEELIEDMLMGFIKLCSSLQAKVAECKELLQIKMEGIMEKKLVTATDVHVIEDDIMEVQSKDLIEDLKLRNEELETAFLLKEKEIDALETSMKELEDIISSIKREKIQVEETLAVAQRENIVVSRYLDDVRTEIVLSNVAKTHDKMIERKISELDIGKQEQELDISVMEVENLHLSQNISELEAQLSHMTDEIEANRLEIKDYKSHIEDLKDEIAQEQAEIKNLKFEHSKKLQEVEKQLFDAQEESEVLKNSHSKLQSAIENLIEECSLLQKRIENFQRQKLEMCELMSHYELESGDLQNKIVENLNKIEVLEGNITLLHCDFTLKEETLTSQLESILQESREQELKISKVDVILKHINHEHMAEIENLKQENLQLSTQVCSFLDEREKLSSNAVKEDAILRSDKNKLEVSFQEVQLKLKLYETEVYNLTQESTNKVEGLVNLLNASKQSEEMLMSDIEHMQRMTESLKSSESTFRRLTNELELKLKASDYENQQLNEDVSGLKIQLLKLSQFQNEILNLKTSLEEEKYEREKLEGLLLSTSEECNDLKVEKMAFSDKISYLQKALHDAEDDRRSKVALEEKLLRLEADLTTTEASYAQEDGIKNEINSIKKVNNEYWQKIQNLEEEKSEIKRKAQALEKELAQRKMERVEEKVSVKVENALHGRMKGAQVQKEAALESKIHSLQTELTEALEANNIYQLQVNGFFSEKQRNKTENFEKIASLETELKEMRERYLHMSLQYAEVEAQREELVMQLKSVAKKEKKWFS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	69.100
SRP064423	SRR2545915	Juvenile tuber	80.260
SRP108465	SRR5643513	five period of Gastrodia elata	25.750
	SRR5643514	five period of Gastrodia elata	23.620
	SRR5643515	five period of Gastrodia elata	21.140
	SRR5643524	five period of Gastrodia elata	22.500
	SRR5643525	five period of Gastrodia elata	18.490
	SRR5643528	five period of Gastrodia elata	14.310
	SRR5643658	five period of Gastrodia elata	23.100
	SRR5643659	five period of Gastrodia elata	18.130
	SRR5643660	five period of Gastrodia elata	21.500
	SRR5643661	five period of Gastrodia elata	19.000
	SRR5643662	five period of Gastrodia elata	17.950
	SRR5643663	five period of Gastrodia elata	20.330
	SRR5643664	five period of Gastrodia elata	22.600
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	33.790
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	43.670
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	50.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	43.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	49.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	27.150
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	30.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.950
SRP279888	Gastro	Gastrodia elata tuber	28.03
	Juven	Juvenile tuber	64.63
	Mother_Gastro	Mother tuber of Gastrodia elata	23.99
	Mother_Juven	Mother tuber of Juvenile	58.36