Detail information of GWHGAAEX003708/evm.TU.scaffold_139.130


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|586645658|ref|XP_006827693.1|4.51E-72hypothetical protein AMTR_s00009p00257810 [Amborella trichopoda]
Swissprottr|P93788|REMO_SOLTU2.00E-69Remorin
trEMBLtr|W1NIQ9|W1NIQ9_AMBTC2.00E-72Uncharacterized protein {ECO:0000313|EMBL:ERM95109.1}
TAIRAT5G237508.00E-62Remorin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013525637602571143+
Transcript Sequence

Network for GWHGAAEX003708

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03766.12Remorin_N37833.10E-15
PF03763.12Remorin_C881911.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms280.880
SRR2545915Juvenile tuber402.730
SRP108465SRR5643513five period of Gastrodia elata352.270
SRR5643514five period of Gastrodia elata345.930
SRR5643515five period of Gastrodia elata296.950
SRR5643524five period of Gastrodia elata297.360
SRR5643525five period of Gastrodia elata362.840
SRR5643528five period of Gastrodia elata381.830
SRR5643658five period of Gastrodia elata453.860
SRR5643659five period of Gastrodia elata318.240
SRR5643660five period of Gastrodia elata312.540
SRR5643661five period of Gastrodia elata294.120
SRR5643662five period of Gastrodia elata271.310
SRR5643663five period of Gastrodia elata318.090
SRR5643664five period of Gastrodia elata316.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1396.830
SRR6049655Rhizomagastrodiae_C368-T10_good_1282.000
SRR6049656Rhizomagastrodiae_C368-T07_good_1446.790
SRR6049657Rhizomagastrodiae_C368-T07_good_1330.230
SRR6049658Rhizomagastrodiae_C368-T04_good_1302.460
SRR6049659Rhizomagastrodiae_C368-T04_good_1275.270
SRR6049660Rhizomagastrodiae_C368-T01_good_1302.790
SRR6049661Rhizomagastrodiae_C368-T04_good_1329.150
SRR6049662Rhizomagastrodiae_C368-T01_good_1332.960
SRR6049663Rhizomagastrodiae_C368-T01_good_1324.280
SRR6049664Rhizomagastrodiae_C368-T10_good_1429.680
SRR6049665Rhizomagastrodiae_C368-T10_good_1429.680
SRP279888GastroGastrodia elata tuber 307.59
JuvenJuvenile tuber588.48
Mother_GastroMother tuber of Gastrodia elata 255.79
Mother_JuvenMother tuber of Juvenile 459.96