Detail information of GWHGAAEX003714/evm.TU.scaffold_139.136


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127181|ref|XP_008787053.1|1.41E-92PREDICTED: transcription factor TCP7-like [Phoenix dactylifera]
Swissprottr|Q9FMX2|TCP7_ARATH4.00E-83Transcription factor TCP7
trEMBLtr|G3BGV4|G3BGV4_SOLLC2.00E-89TCP transcription factor 14 {ECO:0000313|EMBL:ADM87263.1}
TAIRAT5G232801.00E-82TCP family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013526005282601733-
Transcript Sequence

Network for GWHGAAEX003714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.12TCP381199.90E-35
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
K16221TCP21, CHE Circadian rhythm - plant map04712

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms77.810
SRR2545915Juvenile tuber62.530
SRP108465SRR5643513five period of Gastrodia elata199.400
SRR5643514five period of Gastrodia elata209.270
SRR5643515five period of Gastrodia elata171.430
SRR5643524five period of Gastrodia elata198.320
SRR5643525five period of Gastrodia elata204.550
SRR5643528five period of Gastrodia elata152.240
SRR5643658five period of Gastrodia elata264.840
SRR5643659five period of Gastrodia elata145.870
SRR5643660five period of Gastrodia elata121.080
SRR5643661five period of Gastrodia elata153.770
SRR5643662five period of Gastrodia elata166.000
SRR5643663five period of Gastrodia elata128.310
SRR5643664five period of Gastrodia elata115.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1200.930
SRR6049655Rhizomagastrodiae_C368-T10_good_1192.120
SRR6049656Rhizomagastrodiae_C368-T07_good_1201.010
SRR6049657Rhizomagastrodiae_C368-T07_good_1215.990
SRR6049658Rhizomagastrodiae_C368-T04_good_1183.260
SRR6049659Rhizomagastrodiae_C368-T04_good_1206.690
SRR6049660Rhizomagastrodiae_C368-T01_good_1242.010
SRR6049661Rhizomagastrodiae_C368-T04_good_1191.260
SRR6049662Rhizomagastrodiae_C368-T01_good_1234.420
SRR6049663Rhizomagastrodiae_C368-T01_good_1257.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1194.390
SRR6049665Rhizomagastrodiae_C368-T10_good_1194.390
SRP279888GastroGastrodia elata tuber 112.14
JuvenJuvenile tuber129.95
Mother_GastroMother tuber of Gastrodia elata 202.92
Mother_JuvenMother tuber of Juvenile 102.60