Detail information of GWHGAAEX003716/evm.TU.scaffold_139.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|310823651|ref|YP_003956009.1|6.00E-40major facilitator family transporter [Stigmatella aurantiaca DW4/3-1]
KOGKOG13300Sugar transporter/spinster transmembrane protein
nrgi|695026055|ref|XP_009400301.1|0PREDICTED: probable sphingolipid transporter spinster homolog 2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FLG8|SPNS2_ARATH0Probable sphingolipid transporter spinster homolog 2
trEMBLtr|J3LZR0|J3LZR0_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB04G26350.1}
TAIRAT5G645000Major facilitator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013526358662675640-
Transcript Sequence

Network for GWHGAAEX003716

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.15MFS_1914551.00E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.310
SRR2545915Juvenile tuber30.360
SRP108465SRR5643513five period of Gastrodia elata29.120
SRR5643514five period of Gastrodia elata33.490
SRR5643515five period of Gastrodia elata28.480
SRR5643524five period of Gastrodia elata33.530
SRR5643525five period of Gastrodia elata46.030
SRR5643528five period of Gastrodia elata28.670
SRR5643658five period of Gastrodia elata60.860
SRR5643659five period of Gastrodia elata15.050
SRR5643660five period of Gastrodia elata17.810
SRR5643661five period of Gastrodia elata18.030
SRR5643662five period of Gastrodia elata9.300
SRR5643663five period of Gastrodia elata8.810
SRR5643664five period of Gastrodia elata7.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.240
SRR6049655Rhizomagastrodiae_C368-T10_good_129.300
SRR6049656Rhizomagastrodiae_C368-T07_good_135.760
SRR6049657Rhizomagastrodiae_C368-T07_good_150.100
SRR6049658Rhizomagastrodiae_C368-T04_good_147.760
SRR6049659Rhizomagastrodiae_C368-T04_good_164.160
SRR6049660Rhizomagastrodiae_C368-T01_good_142.290
SRR6049661Rhizomagastrodiae_C368-T04_good_148.320
SRR6049662Rhizomagastrodiae_C368-T01_good_135.020
SRR6049663Rhizomagastrodiae_C368-T01_good_138.250
SRR6049664Rhizomagastrodiae_C368-T10_good_138.960
SRR6049665Rhizomagastrodiae_C368-T10_good_138.960
SRP279888GastroGastrodia elata tuber 11.06
JuvenJuvenile tuber15.16
Mother_GastroMother tuber of Gastrodia elata 53.14
Mother_JuvenMother tuber of Juvenile 48.21