Detail information of GWHGAAEX003729/evm.TU.scaffold_14.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|501436151|ref|YP_007984945.1|2.00E-36membrane protein of unknown function [Candidatus Saccharimonas aalborgensis]
KOGKOG21180Predicted membrane protein, contains two CBS domains
nrgi|356524776|ref|XP_003531004.1|0PREDICTED: DUF21 domain-containing protein At2g14520-like [Glycine max]
Swissprottr|Q8VZI2|Y4370_ARATH0DUF21 domain-containing protein At4g33700
trEMBLtr|I1KQT9|I1KQT9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G06780.1}
TAIRAT4G337000CBS domain-containing protein with a domain of unknown function (DUF21)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000012613829643607+
Transcript Sequence

Network for GWHGAAEX003729

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01595.19DUF21181891.30E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.130
SRR2545915Juvenile tuber48.780
SRP108465SRR5643513five period of Gastrodia elata11.460
SRR5643514five period of Gastrodia elata11.260
SRR5643515five period of Gastrodia elata7.780
SRR5643524five period of Gastrodia elata8.480
SRR5643525five period of Gastrodia elata12.140
SRR5643528five period of Gastrodia elata8.920
SRR5643658five period of Gastrodia elata19.420
SRR5643659five period of Gastrodia elata14.000
SRR5643660five period of Gastrodia elata20.140
SRR5643661five period of Gastrodia elata21.060
SRR5643662five period of Gastrodia elata21.770
SRR5643663five period of Gastrodia elata23.850
SRR5643664five period of Gastrodia elata24.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.140
SRR6049655Rhizomagastrodiae_C368-T10_good_16.930
SRR6049656Rhizomagastrodiae_C368-T07_good_19.400
SRR6049657Rhizomagastrodiae_C368-T07_good_16.590
SRR6049658Rhizomagastrodiae_C368-T04_good_17.290
SRR6049659Rhizomagastrodiae_C368-T04_good_15.210
SRR6049660Rhizomagastrodiae_C368-T01_good_18.190
SRR6049661Rhizomagastrodiae_C368-T04_good_16.880
SRR6049662Rhizomagastrodiae_C368-T01_good_115.840
SRR6049663Rhizomagastrodiae_C368-T01_good_110.530
SRR6049664Rhizomagastrodiae_C368-T10_good_111.210
SRR6049665Rhizomagastrodiae_C368-T10_good_111.210
SRP279888GastroGastrodia elata tuber 19.36
JuvenJuvenile tuber8.52
Mother_GastroMother tuber of Gastrodia elata 10.30
Mother_JuvenMother tuber of Juvenile 5.57