Gene detail

Detail information of GWHGAAEX003737/evm.TU.scaffold_14.27

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|108758163\|ref\|YP_633877.1\|	3.00E-63	group 2 glycosyl transferase [Myxococcus xanthus DK 1622]
nr	gi\|695023790\|ref\|XP_009399083.1\|	0	PREDICTED: probable xyloglucan glycosyltransferase 9 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9ZQB9\|CSLCC_ARATH	0	Probable xyloglucan glycosyltransferase 12
trEMBL	tr\|A0A059BRM9\|A0A059BRM9_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW68609.1}
TAIR	AT4G07960	0	Cellulose-synthase-like C12

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	951734	957322	-

Transcript Sequence
>GWHTAAEX003737 AGGGCCCTTCCATCCCCATCACCGTCAAAGCTCCAGCTGTCGGCTCGTCTCTTTCTCTATGATTATCTTTAATTACTCCTTAATTAAACTGCTGGATCGGTGGTAATTGCAGGAAATAAAGGAAGGAAGGAAGGAAGGCAGACGTGCGAAAAATCAAAAAGATTAGAAAGCTCCTTCCCCTTCCCATTCCCCCTCCCCCTCCCTATTAATCCCAAGGAAGACGTGTTAGGCTCTTCTTATCGTTAGGAAGAAATACGAGAGCTTGATGCCTGGCAAGGCTGCGAACTGCTTGCATTGTCTTCGTTGTTGCCATCTAGGGTTTTGATTTTCGTAGTGGGGATTCAACAGATTGCTTCCATCGTTCGTAAAATTGTCAGATTTCTTCTTTTTAGGCTGCAATGGCGCCGTCATTTGACTGGTGGTCCAAGGACAAGCTTCGAGGGACGTCGGTGATTGTAAAGATGGAGAACCCTAATTGGTCGATATCGGAGATCTCGCCGCCTGAAGACGGCGCTGTGGACGAGTTTGGGGGCATGAGGAAGGGCGGAAGGGAGAAGAACGCGAAGCAGATAACATGGGTTCTGCTGCTCAAAGCCCACCGCGCTGCAGGCTGCCTCACGCAGCTCGCATCCGCGGCTTTCCATCTGGCCTCGGCTGTGCGCCGCCGCGTGTCTTTGGGACGCACGGACGCGGACGAGAACCCGGCGCTTAGGCGCCGATTTTACTCCTGCATCAAAGCATTCCTCGGGCTCTCGATCTTCCTCCTGGCTTTTGAGATCGCGGCTTATTTCAAGGGATGGGACATCAGCGCTCCGGATCTGCGTGGCCTTCACCTTCTTTCCTCGATCGAGTTTCGTAGCCTCTTCGAAGCCATTTACTCCGGCTGGCTGCTTTTCCGGGCAGAGTACGTTGCTCCTCCTCTGCAGTTCCTCGCCAACGCCTGCGTCATTTTGTTCCTCATTCAGAGCGCCGATCGCTTTGTCCTCTGCCTCGGGTGCTTCTGGATCCGCTTCAAGGGGATCAAACCGGTTGCGAGTTTCAAAGAGGACTTGGAAATGTGCGATTATTTCCCGATGGTTCTCGTTCAGATGCCTATGTGTAACGAGAGAGAGGTTTACCAGCAATCGATTGCTGCTGTTTGTAGCTTGGATTGGCCGAGTACGAATTTGCTCATCCAGGTTTTGGATGATTCTAGCGATGTGGCGACGCAGAACCTGATCAGAGAAGAGGTGGAGAAGTGGGCGCAAACCGGTGTTCGAATCGTGTACCGTCATAGGGTTATTAGAGATGGTTACAAGGCTGGAAATTTGAAGTCTGCAATGAGTTGTAGCTATGTAAAGGACTATGAATTTGTGGCCATTTTTGATGCCGATTTCCAGCCACTGCCGGATTTTTTGAAGAGAACTGTTCCCCACTTTAAGGGCAATGATGAACTGGCTTTAGTGCAAGCTAGGTGGTCTTTTGTGAACAAGGATGAGAACCTGCTTACAAGGCTTCAGAACATTAATCTGTGCTTTCATTTTGAGGTGGAGCAGCAAGTTAATGGGATCTTCATTAACTTTTTCGGATTCAACGGAACTGCCGGAGTTTGGCGAATTAAGGCTTTGGAGGATGCTGGTGGGTGGCTGGAGAGGACTACTGTAGAGGATATGGATATTGCTGTCCGGGCACATCTTATGGGCTGGAAGTTTGTTTTTTTGAATGATGTTGAGTGCCTTTGTGAATTGCCAGAGTCTTATGAAGCTTACATGAAGCAGCAGCACAGGTGGCATTCAGGCCCAATGCAATTGTTCAGGCTTTGTTTACCGGATATTATCAAATCAAAGATTGCATTAAGGAAGAAGGCAAACCTCATCTTTCTGTTCTTCCTCCTCCGAAAGCTCATACTTCCATTCTACTCATTCACCCTCTTCTGCATCATCCTCCCTATGACAATGTTTGTCCCCGAAGCTGAGCTCCCTGCTTGGGTCGTCTGCTACATCCCAGCAACAATGTCGTTCCTCAACATCCTCCCCGCTCCAAGGTCATTTCCGTTCATCGTCCCCTACCTCCTATTTGAGAACACAATGTCCGTTACCAAGTTCAATGCCATGATCTCCGGTCTCTTTCAACTCGGAAGCGCATATGAATGGGTCGTTACGAAGAAGTCTGGTCGCTCGTCCGAGGGCGATCTTCTATCTTTGGTTGAAAAAGAGCCCAAACACCAGCGCGGCAGCTCCGCCCCTGATTTGGTCTCCATCACAAAAGAGGTGTCTTCGAATTTGCCTCCGAGGAAAGAATTGAAGAGGAAGCACAACAGGATCTACCGGAAAGAGCTTGCCCTCGCCTTCCTCCTCTTAACCGCTGCTGCCCGAAGCCTGCTCTCAGCTCAAGGCATACACTTCTATTTCCTCCTCTTTCAAGGCATCTCGTTCTTGGTGGTCGGCCTCGACCTCATTGGGGAGCAGATTGAGTGAGGCAAAAGAAGAAATTGCAGTAAAGGTGTTTTCTTTGGATGGGCATATTCAAGGAGAGGACTGCACCGGTTGTATGTTTCCTTTCTTCTCAAGCAAAAGAAAGGAATTAGTTTTTTAAAAGTACTCGCTCCCCTTTGGAGCTTTGTAGATAGACGAGTTATTCCATTATCTCAGCCTCTTGCTAGATGCTTCAGATTCTTTCAGGTCTTCTTCATTCTTTTTTACCCGGAAAAAAAAAAAAAGAGAGCTTGTCGTGAAGTTGTGTATTTTAATTGAAAGAGTTCGACCATTTCTTTTCTTTTTATTAAGAAAATTTTATTGTACTAGAATAACATGATTATGTATGTTGCATGCGAAATAGATAAAAAATAACATAATTATGTGAAAATTGGGGGTTTTGTAGATCTTGGGATTGAGCTAAGATGAGAGAGAACATGGGCTGCTGAACTGCTAAGGAATCTGTCAGACACTTGAACACTTTTTGCGTTGCTGCTGCAAACGCTGCTCTCATGTTGGTGAGGAGACCATTTAGCAGTTTGCAGCATATTCTTCTAGCTTATCATTCAATCAAATGTTTCTTTACTGTCTGCTTCTTGCCATCAACTAAACTTCAGATTCTCCAGCTTGTTATATACTCTTTTAAGCCCTCGTGTTTAACACATTAACAAATGCTAATTATGATTATATCTCTAATTTGATAAGTTGTTTGGACAATCCAGGA

Network for GWHGAAEX003737

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13641.5	Glyco_tranf_2_3	226	458	1.50E-20

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.850
SRP064423	SRR2545915	Juvenile tuber	34.060
SRP108465	SRR5643513	five period of Gastrodia elata	47.130
	SRR5643514	five period of Gastrodia elata	77.940
	SRR5643515	five period of Gastrodia elata	94.660
	SRR5643524	five period of Gastrodia elata	55.320
	SRR5643525	five period of Gastrodia elata	51.790
	SRR5643528	five period of Gastrodia elata	42.960
	SRR5643658	five period of Gastrodia elata	39.440
	SRR5643659	five period of Gastrodia elata	140.690
	SRR5643660	five period of Gastrodia elata	114.070
	SRR5643661	five period of Gastrodia elata	130.500
	SRR5643662	five period of Gastrodia elata	120.300
	SRR5643663	five period of Gastrodia elata	134.090
	SRR5643664	five period of Gastrodia elata	157.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	69.620
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	69.070
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	77.270
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	62.630
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	33.730
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	77.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	45.060
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	107.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	102.550
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	81.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	81.580
SRP279888	Gastro	Gastrodia elata tuber	78.44
	Juven	Juvenile tuber	98.64
	Mother_Gastro	Mother tuber of Gastrodia elata	33.88
	Mother_Juven	Mother tuber of Juvenile	35.48