Detail information of GWHGAAEX003743/evm.TU.scaffold_14.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|297789135|ref|XP_002862566.1|2.34E-16predicted protein [Arabidopsis lyrata subsp. lyrata]
Swissprottr|Q9FEB4|PSK5_ARATH3.00E-15Phytosulfokine-beta (Precursor)
trEMBLtr|D7MUM9|D7MUM9_ARALL9.00E-17Predicted protein {ECO:0000313|EMBL:EFH38824.1}
TAIRAT5G658709.00E-15phytosulfokine 5 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001211921471192819-
Transcript Sequence

Network for GWHGAAEX003743

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06404.11PSK41732.50E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008283Biological Processcell proliferation
GO:0008083Molecular Functiongrowth factor activity
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.430
SRR2545915Juvenile tuber8.550
SRP108465SRR5643513five period of Gastrodia elata3.300
SRR5643514five period of Gastrodia elata1.390
SRR5643515five period of Gastrodia elata5.630
SRR5643524five period of Gastrodia elata1.950
SRR5643525five period of Gastrodia elata44.940
SRR5643528five period of Gastrodia elata38.420
SRR5643658five period of Gastrodia elata27.160
SRR5643659five period of Gastrodia elata1.340
SRR5643660five period of Gastrodia elata1.800
SRR5643661five period of Gastrodia elata1.490
SRR5643662five period of Gastrodia elata3.470
SRR5643663five period of Gastrodia elata1.870
SRR5643664five period of Gastrodia elata2.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.050
SRR6049655Rhizomagastrodiae_C368-T10_good_14.520
SRR6049656Rhizomagastrodiae_C368-T07_good_11.800
SRR6049657Rhizomagastrodiae_C368-T07_good_12.710
SRR6049658Rhizomagastrodiae_C368-T04_good_13.050
SRR6049659Rhizomagastrodiae_C368-T04_good_11.400
SRR6049660Rhizomagastrodiae_C368-T01_good_16.710
SRR6049661Rhizomagastrodiae_C368-T04_good_14.210
SRR6049662Rhizomagastrodiae_C368-T01_good_11.650
SRR6049663Rhizomagastrodiae_C368-T01_good_13.520
SRR6049664Rhizomagastrodiae_C368-T10_good_12.770
SRR6049665Rhizomagastrodiae_C368-T10_good_12.770
SRP279888GastroGastrodia elata tuber 2.81
JuvenJuvenile tuber0.06
Mother_GastroMother tuber of Gastrodia elata 14.07
Mother_JuvenMother tuber of Juvenile 18.06