Detail information of GWHGAAEX003748/evm.TU.scaffold_14.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743856748|ref|XP_010941940.1|9.54E-171PREDICTED: uncharacterized protein LOC105060052 [Elaeis guineensis]
trEMBLtr|A5BVL4|A5BVL4_VITVI6.00E-161Putative uncharacterized protein {ECO:0000313|EMBL:CAN70606.1}
TAIRAT5G117305.00E-152Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001213288161334068-
Transcript Sequence

Network for GWHGAAEX003748

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02485.20Branch1143394.50E-81
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008375Molecular Functionacetylglucosaminyltransferase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.490
SRR2545915Juvenile tuber2.240
SRP108465SRR5643513five period of Gastrodia elata2.350
SRR5643514five period of Gastrodia elata1.730
SRR5643515five period of Gastrodia elata4.510
SRR5643524five period of Gastrodia elata2.670
SRR5643525five period of Gastrodia elata46.930
SRR5643528five period of Gastrodia elata48.010
SRR5643658five period of Gastrodia elata25.450
SRR5643659five period of Gastrodia elata3.050
SRR5643660five period of Gastrodia elata0.530
SRR5643661five period of Gastrodia elata0.850
SRR5643662five period of Gastrodia elata5.330
SRR5643663five period of Gastrodia elata1.110
SRR5643664five period of Gastrodia elata15.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.580
SRR6049655Rhizomagastrodiae_C368-T10_good_13.780
SRR6049656Rhizomagastrodiae_C368-T07_good_13.410
SRR6049657Rhizomagastrodiae_C368-T07_good_13.670
SRR6049658Rhizomagastrodiae_C368-T04_good_16.550
SRR6049659Rhizomagastrodiae_C368-T04_good_18.860
SRR6049660Rhizomagastrodiae_C368-T01_good_112.150
SRR6049661Rhizomagastrodiae_C368-T04_good_18.690
SRR6049662Rhizomagastrodiae_C368-T01_good_13.280
SRR6049663Rhizomagastrodiae_C368-T01_good_15.850
SRR6049664Rhizomagastrodiae_C368-T10_good_13.150
SRR6049665Rhizomagastrodiae_C368-T10_good_13.150
SRP279888GastroGastrodia elata tuber 1.72
JuvenJuvenile tuber0.69
Mother_GastroMother tuber of Gastrodia elata 13.56
Mother_JuvenMother tuber of Juvenile 8.34