Gene detail

Detail information of GWHGAAEX003757/evm.TU.scaffold_14.47

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|194334297\|ref\|YP_002016157.1\|	5.00E-08	glycoside hydrolase 15-like protein [Prosthecochloris aestuarii DSM 271]
nr	gi\|743761332\|ref\|XP_010941683.1\|	0	PREDICTED: uncharacterized protein LOC105059884 [Elaeis guineensis]
trEMBL	tr\|I1PFV6\|I1PFV6_ORYGL	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA03G0325200.1}
TAIR	AT5G66600	4.00E-143	Protein of unknown function, DUF547

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	1487381	1492978	-

Transcript Sequence
>GWHTAAEX003757 TCCAAACTAAATATTAAAAAAGTTTGGGCACTTTATCCAACAAGCCATTGACAAATAGGGCACATGATTGATCCTATAAGAGCACCATTACTGAGAAGCAAAACTTATGCATGACATTTTATACGCTTTTTGACAAGCAGGATCAATGCAAGGAGTAGTTGAACATTCTTAAGGCTCCTCAAAGGCTTCTTATAATACTCAGGCTTTGGTCTTTTTGAGTCTCGAGATTTTAACTGAGGGCTATGGAAGCAAAGGAGTTTGCTTCTTCACGGCATAAGCGCTCCAAGAGTGAAATTAATAAAAACTGGAAGGGTGATCTATTGGAATCTCCGTCTTCTTCTTGTAATGTGAAGGCAGATATGGAGAAGAAGGTGCCTGAAGCTAATATCCAAGACCAGCTGAAGCAAGAGATTATGCAACTTGAGAAAAGGCTCAAGGATCAAATGGCTGTGCGACTTAGGCTAGAGAAAGCACTGGGATATAGAAAAACAGTGATCAGTTCTTCAAATGAGAGCTGCATGCCTAAGCCAGCCAAAGAGTTGCTAAGAGAGATAGCTGTGTTAGAACTTGAAGTCATGCACTTGGAGCAGTATCTTCTATCACTCTATCGAAAAGCTTTCGATCAACAAACCCCAATCATATCTTCTAATCCTTCCAAAGTCAGATCAAAACCAATGAACTGCCAAAGAAAGTTGTTTAATGAGCTTCCAGGACCTCAAATCTCTTCTATAGCTGCCCATCCATTTGTGCACTCTGCCAGAATTCTGCCATCCCAAATATCAACCAGCAAATTAGAAGATGAGACCTGCCATGAACACATAGATGACGAGCGTAACGTTCACCGCTGTCATTCTTCTCTCAATCACCGTACAGTTTATTCATCCAGAATTTCTCCTTCGGAAGCAGCCCTGGCTAGAGCTCTTCAAGATTGTCATTCTCAGCCATTGTCATTCCTCACTGATTGGCATGATTCGAAATGTGGAATGATAAGCCTGTCAGAATATCTTGGTGCATGCACTACTGACTATGTTGCTGACACACCCAACAAAATTTCTGAAGATATGGTTAGATGCATGGGTGCTATGTACATCAAACTTTCGGATCCTCTACTGAATCCTGGTCAAGCTTCATCACCTACTTCATCATTCTCTTCTATGAGTGCTATTTCTCCTCAGTGTATTGGCGACATGTGGAGTCCTGGGCTCAGATATGATTCAATTCTGGATTCTCGGCTTGTAAATCCTTTCTGCATAGAGGGTTTGAAAGAGTTTAGTGGTCCTTACAATGCTATGGTGGAAATTTCATCAATTAGAACTGAAGATCTGCAGCTGAAGGTTGTCGAAGACTTGCTTCATACATACAAATCGCTTGTTAGTAAGTTGTCTGCTGTCAATGTAAGGAGGATGAAAAATGATGAAAAGCTACCATTTTGGCTCAACTTGCACAATGCTTTGGTGATGCATGCATATCTGGTGCATGGAGTTCCTCAGGGCAGTGTGAAAAGGACCTCACAACTTAACAAGGCCTCGTGCATAGTAGGGGGTCATTCTGTCAATGCCTACATGATACAAAATTCCTTTCTTGGGTGTCATACGCATTATTCTGGGCAGTGGTTCAAAACATTTATGTTTCCAGTGCTGAACTTAAAGACTAGAACTGATTGGAAAAGGCTCTACGCCATTGAGAAACATGAGCCTCTCCTACATTTTGCACTATGTTCAGGAAACCATTCAGATCCTGCAGTCAGAATATACACTGCTAAGAAATGGTACCAACAGTTAGAAACAGCAAAGGAAGAGTATATTCGGGCAACGGTCGGCATTCAGAAAGAGCAGAAGATTTTTCTGCCTATGTTGATTGAGGCTTACGCAAAGGACAGTTGCATGAATTCTCAGATGGTTGTTGATATGATAAAAAGCTATCTTCCTGAGACTATGTGCATAGCTATTAAGAGATGCCAGAGGGGAAGATCTCATAAGATTATTGAGTGGCTTCCTCATAAATTCAATTTTCGTTACTTGTTTTCTAAAGAAGTGGCAAATCAGCAGCTCATTTGATTTATAGTTTCTGAACTACAATATATTCATTTTGTTTGATGTAAAAAAGGAGAGTTCAGAAATTCCATTAGCAGTATGCTCGTTGTATATAAAAATTGTGAAAATTATAGTATTTTTGGGTAAAGATAGTTGAAAAGATTAGTTTTTATATTTTTGTTTTGCAGTGAATTGAGTTGCAGATTAGATTACTTTTGGAGAAATAAAATAGATGAATATTAGCTAGTTTTGTTGAAGAACTCT

Network for GWHGAAEX003757

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14389.5	Lzipper-MIP1	48	128	3.40E-25
PF04784.13	DUF547	386	521	1.20E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.160
SRP064423	SRR2545915	Juvenile tuber	30.560
SRP108465	SRR5643513	five period of Gastrodia elata	17.550
	SRR5643514	five period of Gastrodia elata	14.170
	SRR5643515	five period of Gastrodia elata	11.300
	SRR5643524	five period of Gastrodia elata	17.560
	SRR5643525	five period of Gastrodia elata	13.000
	SRR5643528	five period of Gastrodia elata	15.550
	SRR5643658	five period of Gastrodia elata	13.830
	SRR5643659	five period of Gastrodia elata	9.290
	SRR5643660	five period of Gastrodia elata	3.700
	SRR5643661	five period of Gastrodia elata	5.550
	SRR5643662	five period of Gastrodia elata	5.010
	SRR5643663	five period of Gastrodia elata	8.290
	SRR5643664	five period of Gastrodia elata	4.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.090
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.420
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.130
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.170
SRP279888	Gastro	Gastrodia elata tuber	3.15
	Juven	Juvenile tuber	11.28
	Mother_Gastro	Mother tuber of Gastrodia elata	35.31
	Mother_Juven	Mother tuber of Juvenile	19.92