Gene detail

Detail information of GWHGAAEX003766/evm.TU.scaffold_14.56

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743791427\|ref\|XP_010923431.1\|	4.05E-82	PREDICTED: uncharacterized protein LOC105046523 [Elaeis guineensis]
trEMBL	tr\|I1QEB7\|I1QEB7_ORYGL	3.00E-69	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA07G0245900.1}
TAIR	AT5G47940	2.00E-40	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	1777009	1818354	+

Transcript Sequence
>GWHTAAEX003766 GTCTGGACGAAAGTCCCAGCTTCCAAACAATGAGAGTACCGGGAAAGGAAGAAAGCACGAGCCTTCAGTGGTTCTCTTCCACGAACTGGCTTGTTACCGAGGGTTCCCTGGAAGGTTCGATATCGTTCGTGACCTCAAGCACTGAAGATGCGGAAGCTATCTCAATCGGCGTTCTTCTCGAGAGGCCGGCGGATTCGCCTCCCTGTGAGATCACCGTTTCTTTCAGGGAAAGGCACGAAATTCACTGCATTTATGTTCGGAGCACGGCTCGGGTTTATGAGGTATATTATGCATCTGATGGGGAAGTTTCCAGTAATGAATACTTGTGCACCGTGCGTTGTGGAGCTGCCCCGCACGAATTGGCAGCGGATATCAGCAATACGGCACCCAATTGTATGAATTCAGATATCTCAACGAGTGATAGCACCAATACTGTGGAAGATGGTTGGGTAGAAGTTAAGGCTTCTAGTTCACATCTTCTAGATTATAGAAAACTTTCTATGTCAAGTACATCGCTGGAAAATATTTCTCCCAGAACACAGATCCATTATGAAGCCACAGCTGAAATCTCAGATGCTAGTCCTTGCATGTCAGTCACACTCCGCTTGCTTTCACTTCAGACTAAAACATCAATTCATATTGACGAGATGTACTTTTATACTGATCCTTTTGAAGATACCGGCCCACACCCTCCAACTAGAAACGTCGGAGCAGACTCCTTGTTCTCAATGCTAGTCCCAAGTCTTCTACAAATTTCCAAGTCTGGATCCTCGCAGCTTCAAGACAATGGCTCTTTTATGGAAGCATCCTCTGTGAAGGGAAATTGTAAAGGTCAGGAAAATCTGGACCGCTCACTGGTGGCTTCCAACAAGATAGTGGCTGATCCAGACCAGGCTTCTGAGAACCAGCCAGACGAGCTATATATAAAGCATAATGTTACCCAGGCAAATCCCAGGGACAGACATTTGAGGCTGGCAGATGAAGAAAATGGCTTTTGTCATTTTAAAACGGCTATGGATGATGAAATTAATGCTCGCTCTGTTCGTCTTGAGAAGACCTTGGATGACCTGGTTTCGAGGTTGGGAAAAATTGAGAATTTTTGCTCAAATTTTCAGGAGGGCATTGCTAAACCCCTTGCTGGAATTGAGCTGAGGCTTCAGCGGTTAGAAGAGAAATTAGACGTTTATTCCAAGGTGCCTTTTCCTTTTGATTCTGATGAGACAAATCGCTGTACAAATAATGGCTGTAATTCCTCATTTGTAGAGGTAGAATCTAGTTCTCATAAAAAGGAAGCTGCAGCTGATATGTTTATGGCTCCTTTGCCTGGATCTGTGAAGAGTTCAGGCCTAGTACTTAAGGCACCTGATTTTCTTAATGATGATGATGATGATGATGATGATGAGCCGCTTAGTATTGCTGTCTACTCTTCAGATTTGATATCAAATGAGTGTACTAAATATGGCAAGTGCCTGTCCATTGACAGAGCTTTAGCTTCAGCGTTGGAAGCATTTGTCACATCAACCATCGACATGTCCTCTCTCCATAACTCACATCCAATGATTGATATGCATAATGAGCCACAAAACTTCGGCTACCGATTCTCAGATTCTGCCACAGTTGCAGGCCATTTGGGGACCAATTTAAATTCAGTTCCTGAATCAGTTTCAGGAGACGATAAAAACTGTGATGGGTCATGTGAAGCTCGGGGTGAAGCGCATCTGGGTGAAAATTTCTACTCTGATGCAGTCAATCCTGATGGCACATCTTACAGAATTGATATGAGTGACAGAACAGAGGAAAAAATGTTGGGTGATTTCTTATGTGATAAATTTTCTACCGAAATTGTGACACAGAGATCGAAATGCATTGTATTTAGGGCTCCCGACTTTCTGAATGATGATGATGTTCTCAACTGTGGTGAAGAGTCTGATCACCACACTTGCAGTTTCCCTACTTCAGAAGCTCCTCCCTCAAGTAGGGTAAGTCCTTCTGATGGAACCTTAAATTTACATGAAGAACTACTAAACAATTCATCTCATTATAAATTTGAGGCTTCGTGCAGCAGCCTACCATCAAATTTTGATGGGATTTTGGAAAGTTATTTTTTCTCTGATGGGAAGGAATGTCAGACTTCTGATGATTTATCCGGCAATGCCATATTTCCGGTTGATAAAAATTTAAGAGGTTCTCTACCTCTTGAAATCCTACTGGGAAAAAATTCGGCTGAGCAGATGGACAATAATAGCGAGTGTAGTAACATTGAACTCGGTATGGAGCTTAAATTGCCTCTGATTGAGTCTTTCAGTCGGAATTGCGAATTATCAGAATTATCAGATGGCAATCTGTTGGATTTGGAAGAGAATGCTGTTCAGTGTGAGATTTCTAATATGGTTAAGGCTGACAGTCCTCCACACCATCCTGTATGCTTCAGTTGTGAAGTTCCTTTCTCTAGCCTCATATGATTGGGATGTTTCACTCTGGAAGGGCATATAATAAACAAAGAAAGAAATAAACCACCCTGTTGATGATAACTTCCATGGTGTTGGGATTAAATATTATAAAGTTGAAAATTCAGGTATGTAGATATTTCAAGTTCGTTTTTATCAATAATGCCAGTTGTTAATTTGCTCAAGTTTATGGTCTAATAAAATGTGTAGATATTTGATATAAATCAAAATGAGTCTTGTTTGAACTTTGTTTTCTTGACTCAGTGAATTTCTGATGTAGCCATATAATATTTGTATATATGGATATTACTCAAAACAGTTTTTGTTTATAATTGTTAAAATGAGCACAAAAATTTGTCAATTATAATCCCACAGGCGC

Network for GWHGAAEX003766

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.070
SRP064423	SRR2545915	Juvenile tuber	17.130
SRP108465	SRR5643513	five period of Gastrodia elata	13.710
	SRR5643514	five period of Gastrodia elata	13.890
	SRR5643515	five period of Gastrodia elata	12.770
	SRR5643524	five period of Gastrodia elata	14.520
	SRR5643525	five period of Gastrodia elata	18.070
	SRR5643528	five period of Gastrodia elata	21.710
	SRR5643658	five period of Gastrodia elata	19.700
	SRR5643659	five period of Gastrodia elata	12.040
	SRR5643660	five period of Gastrodia elata	12.960
	SRR5643661	five period of Gastrodia elata	12.090
	SRR5643662	five period of Gastrodia elata	12.990
	SRR5643663	five period of Gastrodia elata	10.580
	SRR5643664	five period of Gastrodia elata	10.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.210
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.680
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.490
SRP279888	Gastro	Gastrodia elata tuber	12.43
	Juven	Juvenile tuber	13.85
	Mother_Gastro	Mother tuber of Gastrodia elata	25.11
	Mother_Juven	Mother tuber of Juvenile	31.96