Detail information of GWHGAAEX003769/evm.TU.scaffold_14.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290980|ref|YP_001737796.1|6.00E-07Brix domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG27817.00E-163U3 small nucleolar ribonucleoprotein (snoRNP) component
nrgi|672130031|ref|XP_008788540.1|0PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Phoenix dactylifera]
trEMBLtr|A5B6W8|A5B6W8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN61017.1}
TAIRAT1G637807.00E-163Ribosomal RNA processing Brix domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001218439891876958-
Transcript Sequence

Network for GWHGAAEX003769

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04427.17Brix902604.70E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14561IMP4 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.020
SRR2545915Juvenile tuber26.220
SRP108465SRR5643513five period of Gastrodia elata42.730
SRR5643514five period of Gastrodia elata42.720
SRR5643515five period of Gastrodia elata40.790
SRR5643524five period of Gastrodia elata44.190
SRR5643525five period of Gastrodia elata32.650
SRR5643528five period of Gastrodia elata30.860
SRR5643658five period of Gastrodia elata40.200
SRR5643659five period of Gastrodia elata42.440
SRR5643660five period of Gastrodia elata37.010
SRR5643661five period of Gastrodia elata35.730
SRR5643662five period of Gastrodia elata39.670
SRR5643663five period of Gastrodia elata36.760
SRR5643664five period of Gastrodia elata36.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.520
SRR6049655Rhizomagastrodiae_C368-T10_good_147.400
SRR6049656Rhizomagastrodiae_C368-T07_good_143.320
SRR6049657Rhizomagastrodiae_C368-T07_good_153.510
SRR6049658Rhizomagastrodiae_C368-T04_good_138.840
SRR6049659Rhizomagastrodiae_C368-T04_good_137.960
SRR6049660Rhizomagastrodiae_C368-T01_good_144.230
SRR6049661Rhizomagastrodiae_C368-T04_good_137.260
SRR6049662Rhizomagastrodiae_C368-T01_good_143.250
SRR6049663Rhizomagastrodiae_C368-T01_good_138.930
SRR6049664Rhizomagastrodiae_C368-T10_good_143.990
SRR6049665Rhizomagastrodiae_C368-T10_good_143.990
SRP279888GastroGastrodia elata tuber 31.70
JuvenJuvenile tuber53.79
Mother_GastroMother tuber of Gastrodia elata 42.70
Mother_JuvenMother tuber of Juvenile 42.73