Detail information of GWHGAAEX003773/evm.TU.scaffold_14.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743837418|ref|XP_010936395.1|0PREDICTED: heparanase-like protein 2 [Elaeis guineensis]
Swissprottr|Q9FF10|HPSE1_ARATH0Heparanase-like protein 1 (Precursor)
trEMBLtr|V4TK76|V4TK76_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR52040.1} (Fragment)
TAIRAT5G078300glucuronidase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001219375491941819-
Transcript Sequence

Network for GWHGAAEX003773

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03662.13Glyco_hydro_79n273466.20E-145
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07964HPSE Metabolic pathways map01100
Glycosaminoglycan degradationmap00531

Gene Ontology

GO term OntologyName
GO:0016798Molecular Functionhydrolase activity, acting on glycosyl bonds
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.170
SRR2545915Juvenile tuber3.720
SRP108465SRR5643513five period of Gastrodia elata17.460
SRR5643514five period of Gastrodia elata12.130
SRR5643515five period of Gastrodia elata5.010
SRR5643524five period of Gastrodia elata6.270
SRR5643525five period of Gastrodia elata1.090
SRR5643528five period of Gastrodia elata1.020
SRR5643658five period of Gastrodia elata0.870
SRR5643659five period of Gastrodia elata1.660
SRR5643660five period of Gastrodia elata2.290
SRR5643661five period of Gastrodia elata2.590
SRR5643662five period of Gastrodia elata2.270
SRR5643663five period of Gastrodia elata2.820
SRR5643664five period of Gastrodia elata1.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.190
SRR6049655Rhizomagastrodiae_C368-T10_good_130.810
SRR6049656Rhizomagastrodiae_C368-T07_good_17.730
SRR6049657Rhizomagastrodiae_C368-T07_good_14.640
SRR6049658Rhizomagastrodiae_C368-T04_good_13.320
SRR6049659Rhizomagastrodiae_C368-T04_good_12.970
SRR6049660Rhizomagastrodiae_C368-T01_good_15.340
SRR6049661Rhizomagastrodiae_C368-T04_good_12.060
SRR6049662Rhizomagastrodiae_C368-T01_good_115.400
SRR6049663Rhizomagastrodiae_C368-T01_good_117.000
SRR6049664Rhizomagastrodiae_C368-T10_good_122.500
SRR6049665Rhizomagastrodiae_C368-T10_good_122.500
SRP279888GastroGastrodia elata tuber 1.24
JuvenJuvenile tuber0.69
Mother_GastroMother tuber of Gastrodia elata 1.77
Mother_JuvenMother tuber of Juvenile 0.80