Detail information of GWHGAAEX003776/evm.TU.scaffold_14.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743874370|ref|XP_010907059.1|6.41E-73PREDICTED: uncharacterized protein LOC105033825 [Elaeis guineensis]
trEMBLtr|M0TZC5|M0TZC5_MUSAM5.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P11160_001}
TAIRAT4G132708.00E-45Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001219597761971319-
Transcript Sequence

Network for GWHGAAEX003776

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_21262195.30E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.980
SRR2545915Juvenile tuber39.740
SRP108465SRR5643513five period of Gastrodia elata51.910
SRR5643514five period of Gastrodia elata52.640
SRR5643515five period of Gastrodia elata58.300
SRR5643524five period of Gastrodia elata58.670
SRR5643525five period of Gastrodia elata162.040
SRR5643528five period of Gastrodia elata166.320
SRR5643658five period of Gastrodia elata195.940
SRR5643659five period of Gastrodia elata57.440
SRR5643660five period of Gastrodia elata56.490
SRR5643661five period of Gastrodia elata60.400
SRR5643662five period of Gastrodia elata64.220
SRR5643663five period of Gastrodia elata58.290
SRR5643664five period of Gastrodia elata55.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1100.690
SRR6049656Rhizomagastrodiae_C368-T07_good_147.510
SRR6049657Rhizomagastrodiae_C368-T07_good_143.380
SRR6049658Rhizomagastrodiae_C368-T04_good_140.960
SRR6049659Rhizomagastrodiae_C368-T04_good_138.660
SRR6049660Rhizomagastrodiae_C368-T01_good_138.390
SRR6049661Rhizomagastrodiae_C368-T04_good_135.150
SRR6049662Rhizomagastrodiae_C368-T01_good_142.920
SRR6049663Rhizomagastrodiae_C368-T01_good_139.170
SRR6049664Rhizomagastrodiae_C368-T10_good_164.430
SRR6049665Rhizomagastrodiae_C368-T10_good_164.430
SRP279888GastroGastrodia elata tuber 54.85
JuvenJuvenile tuber66.20
Mother_GastroMother tuber of Gastrodia elata 90.88
Mother_JuvenMother tuber of Juvenile 66.07