Gene detail

Detail information of GWHGAAEX003779/evm.TU.scaffold_14.71

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|317123691\|ref\|YP_004097803.1\|	1.00E-112	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
nr	gi\|672115498\|ref\|XP_008780900.1\|	0	PREDICTED: subtilisin-like protease [Phoenix dactylifera]
Swissprot	tr\|O65351\|SUBL_ARATH	0	Subtilisin-like protease (Precursor)
trEMBL	tr\|Q1EPF3\|Q1EPF3_MUSAC	0	Subtilisin-like serine proteinase, putative {ECO:0000313\|EMBL:ABF70004.1}
TAIR	AT5G67360	0	Subtilase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	2034938	2037618	-

Transcript Sequence
>GWHTAAEX003779 GTGAGCATAATATTTTTTATTTATTTTATAAAACTTAAATCATTCCCAATATGCGGAAGAAGGCTGACCCCTCTTTCAAACCCATCCATCGTCCTTCCCAGTGGAGCTTCCCTTTCCCAATTCCCACCCACCGTTCCCCCCCACCTATATAAGCAGCTGCGCACTCACGCCACCGGTCAGTCCCCTGATGGCCCGATTACTCTTCTTCCTCCTCCTTCTCTTCCTCCTTTCCCTCTCGGTCGCAGGGAAGCGAGCTTCCTACATCGTTCACATGTCCAAAACCCTAAAACCGTCCAGATTCGCAGAGCATGCCCACTGGTTCGACGCGTCCCTTCGCTCCGTCTCGGAATCTGCGGAGATGCTCTACGTCTACGGAACCGCCGCACATGGATTCTCGGCCAGGCTCACCGCCTCCGAGGCCCGATCTCTGTCCCACAGCCCCGGAGTCGTCTCCGTCCTCCCCGACGTCCCGTACCATCTCCACACTACGCGCACCCCTGAGTTCCTCGGCCTCAATCCCTCCGATGAACTTCTCCCTGCATCATCCACCACCTCCGATGTCATCGTCGGCGTTCTTGACACCGGCGTTTGGCCTGAGCGCGGCAACTTCGACGACTCTGGCTTCGGCCCCGTCCCCGCCGGCTGGAAGGGCCAGTGCGTCGCCTCACAGGACTTCGATCCTGCCAAGACCTGCAACCGCAAGCTCATTGGCGCCAGATTCTTCTCCAAGGGATACGAGTCCAGCACAGGGATCATTGGCGACAGCAGCCATGATTTCCGATCTCCCCGCGACGCCGACGGCCACGGCACCCATACCTCCACCACTGCCGCCGGATCCGCCGTCGCCAACTCCAGCCTCCTCGGATTCGCGCAGGGCACTGCCCGCGGCATGGCCCCCCGTGCCAGGATCGCCGTCTACAAGGTCTGCTGGACCGGCGGATGCTTCAGCTCCGACATCCTAGCGGCCATAGATGCCGCGGTGGAGGACGGTTGTCATGTCCTCTCCCTCTCGCTTGGCGGCGGCGCGTCCGATTACTACCGCGACAGCGTCGCCATCGGTGCCTTCAATGCCATGGAGAAAGGCGTCTTCGTCTCCTGCTCGGCTGGCAACTCCGGCCCCAAAACCTCCTCTCTGTCGAATCTTGCGCCGTGGATCACCACCGTTGGAGCCGGGACAATTGATCGGGATTTTCCGGCGTACGTCTTGCTGGGCGACGGAAAGAAGAATTACACAGGTGTGTCGCTCTACAGCGGTAAGCTCCTTCCCTCCTCTCCCATCCCCTTGATCTATGCCGGCAACGCCACCAACTCCACCAACGGGAATCTCTGCATGACCGGAACCCTGATCCCCGAAAAAGTTGCCGGAAAATTGGTCCTCTGCGAGAGAGGAATCAACGCCAGGGTTCAGAAGGGGGTGGTTGTGAGAGACGCTGGCGGCGCGGGAATGGTGCTGATTAACTCCGCCGCCAACGGCGAAGAGCTCGTCGCCGACGCCCATCTCCTCCCCGCAGCATTGGTCGGGGAGAAGGCTGGGAATCTCATCAGAGAGTATTCGATCTCGGATTTCAATCCCATGGCCACCATCGTCTTCGGCGGCACCAAGATCGGCATAAGCCCGTCGCCGGTCGTTGCCGCGTTCTCCTCCCGCGGGCCGAACTCGATAACGCCGGAGATTCTGAAACCGGATATGATCGCCCCAGGCGTCAACATCCTCGCCGGATGGAGCGGCGCTGTCGGACCGACGGGGCTGCTTGCAGATTCGCGGCGGACCGATTTCAACATCATCTCAGGCACATCGATGTCCTGCCCGCACGTCAGCGGCCTGGCCGCCCTTCTCAAGGAGGCGCATCCGGATTGGAGCCCGGCAGCGATAAAATCGGCGTTGATGACCACAGCCTACGTCGTGTACCCTGGCGGCGATGGAATCCTCGACGTTGCCACCGGACAGGCGGCGACGCCGTTCGATTTCGGCGCCGGGCATGTTGATCCCAAGAGGGCGACCGATCCCGGGCTGGTCTACGACCTTGCCGCCGACGATTACCTCGAATTTCTCTGCGCTCTCAACTACACCTCGCTTCAGATCGAGGCTCTGCTGATCGGCCGGAATTTCTCATGCGACCAGCGGAAGAGCTACGCTGTGTCGAAGCTGAATTACCCGTCGTTTTCTGTCGTGTTTGCGACAGCGGTCGGAGGGGATGGCGAGGGAGGGACGGCGGCTGTGGTGCACGAGAGGACGGTCACGAATGTTGGACCGCCGGGTGTTTATAGAGTGACTTCGACTGCGAAAGTTGATGGCGGGGAGGTTAGGATCACGGTAGAACCGGCGGTGCTGAGTTTCTCGCGGACGGGGGAGAAGAAGAGCTATGCGGCGAAATTCACGGCGCCGTCGCTGCCGTCGGGTTCGTCCGGGTCCGGCCGGCTGGAGTGGTCTGACGGGAAGCACACAGTCGCCAGTGCTATTGCTTTCACTTGGACCTGAAAAAAAATGATCCCAGAAAAATAAAGCTCCATCCCAAAATTCCAAAAATGCTTTGCTTGGAGAATCTGTGCTGTAGCCGCTCGTAATGGCAGGGGCTTAATTATAAGGTGCTTAGTTGTATTTGATTTGATAAAAAAAAGGGCGAATCTGTAATTTTTTGTTTTTATGCTGTTTCTTAAATGAAAAATATTAATTAGCTCGC

Network for GWHGAAEX003779

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	24	99	2.70E-16
PF00082.21	Peptidase_S8	123	597	4.20E-47
PF02225.21	PA	373	451	5.70E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.420
SRP064423	SRR2545915	Juvenile tuber	31.130
SRP108465	SRR5643513	five period of Gastrodia elata	165.310
	SRR5643514	five period of Gastrodia elata	173.520
	SRR5643515	five period of Gastrodia elata	175.100
	SRR5643524	five period of Gastrodia elata	142.370
	SRR5643525	five period of Gastrodia elata	224.400
	SRR5643528	five period of Gastrodia elata	137.830
	SRR5643658	five period of Gastrodia elata	265.600
	SRR5643659	five period of Gastrodia elata	132.270
	SRR5643660	five period of Gastrodia elata	99.650
	SRR5643661	five period of Gastrodia elata	151.440
	SRR5643662	five period of Gastrodia elata	127.950
	SRR5643663	five period of Gastrodia elata	178.630
	SRR5643664	five period of Gastrodia elata	194.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	162.780
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	223.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	187.530
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	143.160
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	153.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	161.780
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	241.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	148.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	206.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	287.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	219.560
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	219.560
SRP279888	Gastro	Gastrodia elata tuber	65.79
	Juven	Juvenile tuber	24.52
	Mother_Gastro	Mother tuber of Gastrodia elata	49.20
	Mother_Juven	Mother tuber of Juvenile	13.18