Detail information of GWHGAAEX003780/evm.TU.scaffold_14.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG37580Uncharacterized conserved protein
nrgi|743826293|ref|XP_010933248.1|0PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6 [Elaeis guineensis]
trEMBLtr|M0TQE9|M0TQE9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P14460_001}
TAIRAT1G317800Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001220406362095468+
Transcript Sequence

Network for GWHGAAEX003780

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06419.10COG6316673.80E-209
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006891Biological Processintra-Golgi vesicle-mediated transport
GO:0017119Cellular ComponentGolgi transport complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.510
SRR2545915Juvenile tuber12.010
SRP108465SRR5643513five period of Gastrodia elata22.500
SRR5643514five period of Gastrodia elata22.490
SRR5643515five period of Gastrodia elata22.330
SRR5643524five period of Gastrodia elata24.250
SRR5643525five period of Gastrodia elata20.850
SRR5643528five period of Gastrodia elata33.770
SRR5643658five period of Gastrodia elata25.770
SRR5643659five period of Gastrodia elata20.890
SRR5643660five period of Gastrodia elata20.560
SRR5643661five period of Gastrodia elata24.770
SRR5643662five period of Gastrodia elata19.250
SRR5643663five period of Gastrodia elata20.430
SRR5643664five period of Gastrodia elata21.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.420
SRR6049655Rhizomagastrodiae_C368-T10_good_120.500
SRR6049656Rhizomagastrodiae_C368-T07_good_123.710
SRR6049657Rhizomagastrodiae_C368-T07_good_124.410
SRR6049658Rhizomagastrodiae_C368-T04_good_128.890
SRR6049659Rhizomagastrodiae_C368-T04_good_128.590
SRR6049660Rhizomagastrodiae_C368-T01_good_125.480
SRR6049661Rhizomagastrodiae_C368-T04_good_126.100
SRR6049662Rhizomagastrodiae_C368-T01_good_131.220
SRR6049663Rhizomagastrodiae_C368-T01_good_131.390
SRR6049664Rhizomagastrodiae_C368-T10_good_130.050
SRR6049665Rhizomagastrodiae_C368-T10_good_130.050
SRP279888GastroGastrodia elata tuber 24.94
JuvenJuvenile tuber31.52
Mother_GastroMother tuber of Gastrodia elata 28.92
Mother_JuvenMother tuber of Juvenile 32.15