Detail information of GWHGAAEX003793/evm.TU.scaffold_14.92
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|218930156|ref|YP_002348031.1| | 1.00E-59 | adenine phosphoribosyltransferase [Yersinia pestis CO92] |
| KOG | KOG1712 | 2.00E-96 | Adenine phosphoribosyl transferases |
| nr | gi|194701624|gb|ACF84896.1| | 8.02E-103 | unknown [Zea mays] |
| Swissprot | tr|Q43199|APT1_WHEAT | 2.00E-103 | Adenine phosphoribosyltransferase 1 |
| trEMBL | tr|B4FS03|B4FS03_MAIZE | 3.00E-103 | Uncharacterized protein {ECO:0000313|EMBL:ACF84896.1, ECO:0000313|EnsemblPlants:GRMZM2G131907_P01} |
| TAIR | AT1G27450 | 2.00E-96 | adenine phosphoribosyl transferase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000012 | 2664788 | 2704577 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003793
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00156.26 | Pribosyltran | 85 | 205 | 6.30E-20 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00759 | APRT, apt | Metabolic pathways | map01100 |
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006168 | Biological Process | adenine salvage |
| GO:0009116 | Biological Process | nucleoside metabolic process |
| GO:0003999 | Molecular Function | adenine phosphoribosyltransferase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.880 |
| SRR2545915 | Juvenile tuber | 28.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 33.780 |
| SRR5643514 | five period of Gastrodia elata | 69.980 | |
| SRR5643515 | five period of Gastrodia elata | 51.000 | |
| SRR5643524 | five period of Gastrodia elata | 51.230 | |
| SRR5643525 | five period of Gastrodia elata | 230.170 | |
| SRR5643528 | five period of Gastrodia elata | 170.710 | |
| SRR5643658 | five period of Gastrodia elata | 203.760 | |
| SRR5643659 | five period of Gastrodia elata | 22.160 | |
| SRR5643660 | five period of Gastrodia elata | 17.430 | |
| SRR5643661 | five period of Gastrodia elata | 24.270 | |
| SRR5643662 | five period of Gastrodia elata | 29.340 | |
| SRR5643663 | five period of Gastrodia elata | 25.030 | |
| SRR5643664 | five period of Gastrodia elata | 23.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.520 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 46.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 29.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.370 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.420 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.270 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 32.550 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.930 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 56.140 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 56.140 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.02 |
| Juven | Juvenile tuber | 21.89 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 22.73 | |
| Mother_Juven | Mother tuber of Juvenile | 10.50 |