Detail information of GWHGAAEX003804/evm.TU.scaffold_14.111
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672137808|ref|XP_008792638.1| | 0 | PREDICTED: phragmoplast orienting kinesin 2 [Phoenix dactylifera] |
| Swissprot | tr|Q27IK6|POK2_ARATH | 0 | Phragmoplast orienting kinesin 2 |
| trEMBL | tr|A0A067EDC0|A0A067EDC0_CITSI | 0 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} (Fragment) |
| trEMBL | tr|A0A067EDC0|A0A067EDC0_CITSI | 2.00E-105 | Kinesin-like protein {ECO:0000256|RuleBase:RU000394} (Fragment) |
| TAIR | AT3G17360 | 0 | phragmoplast orienting kinesin 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000012 | 3257948 | 3291016 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003804
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00225.22 | Kinesin | 235 | 565 | 7.50E-110 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0007018 | Biological Process | microtubule-based movement |
| GO:0008017 | Molecular Function | microtubule binding |
| GO:0003777 | Molecular Function | microtubule motor activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.710 |
| SRR2545915 | Juvenile tuber | 4.030 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.280 |
| SRR5643514 | five period of Gastrodia elata | 1.840 | |
| SRR5643515 | five period of Gastrodia elata | 1.220 | |
| SRR5643524 | five period of Gastrodia elata | 1.680 | |
| SRR5643525 | five period of Gastrodia elata | 0.570 | |
| SRR5643528 | five period of Gastrodia elata | 0.440 | |
| SRR5643658 | five period of Gastrodia elata | 0.710 | |
| SRR5643659 | five period of Gastrodia elata | 0.920 | |
| SRR5643660 | five period of Gastrodia elata | 0.690 | |
| SRR5643661 | five period of Gastrodia elata | 0.980 | |
| SRR5643662 | five period of Gastrodia elata | 0.730 | |
| SRR5643663 | five period of Gastrodia elata | 0.950 | |
| SRR5643664 | five period of Gastrodia elata | 0.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.450 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.820 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.290 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.200 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.840 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.020 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.920 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.730 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.730 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.89 |
| Juven | Juvenile tuber | 0.80 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.45 | |
| Mother_Juven | Mother tuber of Juvenile | 0.53 |