Detail information of GWHGAAEX003809/evm.TU.scaffold_14.121
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|94971006|ref|YP_593054.1| | 8.00E-18 | serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|743859881|ref|XP_010942863.1| | 0 | PREDICTED: serine/threonine-protein kinase D6PK [Elaeis guineensis] |
| Swissprot | tr|Q39183|D6KL2_ARATH | 0 | Serine/threonine-protein kinase D6PKL2 |
| trEMBL | tr|F6I571|F6I571_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB62026.1} |
| TAIR | AT5G47750 | 0 | D6 protein kinase like 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000012 | 3547872 | 3552707 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003809
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 222 | 372 | 3.60E-36 |
| PF00069.24 | Pkinase | 457 | 560 | 2.80E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.400 |
| SRR2545915 | Juvenile tuber | 4.310 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.150 |
| SRR5643514 | five period of Gastrodia elata | 2.440 | |
| SRR5643515 | five period of Gastrodia elata | 1.340 | |
| SRR5643524 | five period of Gastrodia elata | 2.410 | |
| SRR5643525 | five period of Gastrodia elata | 11.080 | |
| SRR5643528 | five period of Gastrodia elata | 6.210 | |
| SRR5643658 | five period of Gastrodia elata | 10.990 | |
| SRR5643659 | five period of Gastrodia elata | 1.840 | |
| SRR5643660 | five period of Gastrodia elata | 1.470 | |
| SRR5643661 | five period of Gastrodia elata | 1.100 | |
| SRR5643662 | five period of Gastrodia elata | 4.370 | |
| SRR5643663 | five period of Gastrodia elata | 2.190 | |
| SRR5643664 | five period of Gastrodia elata | 4.170 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.050 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.410 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.270 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.81 |
| Juven | Juvenile tuber | 7.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.51 | |
| Mother_Juven | Mother tuber of Juvenile | 2.03 |