Detail information of GWHGAAEX003818/evm.TU.scaffold_14.151
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|430749954|ref|YP_007212862.1| | 8.00E-11 | protein kinase family protein [Thermobacillus composti KWC4] |
| nr | gi|661882673|emb|CDP13676.1| | 2.02E-35 | unnamed protein product [Coffea canephora] |
| Swissprot | tr|C0LGR3|Y4265_ARATH | 2.00E-36 | Probable LRR receptor-like serine/threonine-protein kinase At4g26540 (Precursor) |
| trEMBL | tr|A0A068UZ75|A0A068UZ75_COFCA | 8.00E-36 | Coffea canephora |
| TAIR | AT5G56040 | 9.00E-34 | Leucine-rich receptor-like protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000012 | 5907014 | 5907843 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX003818
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 4 | 107 | 1.80E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-XI-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.330 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.230 |
| SRR5643514 | five period of Gastrodia elata | 4.750 | |
| SRR5643515 | five period of Gastrodia elata | 1.520 | |
| SRR5643524 | five period of Gastrodia elata | 1.960 | |
| SRR5643525 | five period of Gastrodia elata | 3.030 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 4.800 | |
| SRR5643659 | five period of Gastrodia elata | 3.260 | |
| SRR5643660 | five period of Gastrodia elata | 6.210 | |
| SRR5643661 | five period of Gastrodia elata | 1.830 | |
| SRR5643662 | five period of Gastrodia elata | 6.050 | |
| SRR5643663 | five period of Gastrodia elata | 8.890 | |
| SRR5643664 | five period of Gastrodia elata | 7.810 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.940 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.960 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.660 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.210 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.080 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.080 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.22 |
| Juven | Juvenile tuber | 4.04 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.06 | |
| Mother_Juven | Mother tuber of Juvenile | 0.33 |