Detail information of GWHGAAEX003822/evm.TU.scaffold_14.157


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28874.00E-109Membrane protein involved in ER to Golgi transport
nrgi|672178922|ref|XP_008809612.1|8.01E-136PREDICTED: protein transport protein SFT2-like [Phoenix dactylifera]
trEMBLtr|M0TF49|M0TF49_MUSAM2.00E-127Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P06090_001}
TAIRAT5G560204.00E-109Got1/Sft2-like vescicle transport protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001263030896331301-
Transcript Sequence

Network for GWHGAAEX003822

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04178.11Got11012125.30E-29
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.390
SRR2545915Juvenile tuber28.490
SRP108465SRR5643513five period of Gastrodia elata25.150
SRR5643514five period of Gastrodia elata21.580
SRR5643515five period of Gastrodia elata21.580
SRR5643524five period of Gastrodia elata21.040
SRR5643525five period of Gastrodia elata22.570
SRR5643528five period of Gastrodia elata20.670
SRR5643658five period of Gastrodia elata20.430
SRR5643659five period of Gastrodia elata19.150
SRR5643660five period of Gastrodia elata17.270
SRR5643661five period of Gastrodia elata19.830
SRR5643662five period of Gastrodia elata18.050
SRR5643663five period of Gastrodia elata18.640
SRR5643664five period of Gastrodia elata18.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.890
SRR6049655Rhizomagastrodiae_C368-T10_good_116.300
SRR6049656Rhizomagastrodiae_C368-T07_good_124.090
SRR6049657Rhizomagastrodiae_C368-T07_good_125.240
SRR6049658Rhizomagastrodiae_C368-T04_good_124.910
SRR6049659Rhizomagastrodiae_C368-T04_good_127.740
SRR6049660Rhizomagastrodiae_C368-T01_good_122.820
SRR6049661Rhizomagastrodiae_C368-T04_good_125.990
SRR6049662Rhizomagastrodiae_C368-T01_good_122.010
SRR6049663Rhizomagastrodiae_C368-T01_good_125.550
SRR6049664Rhizomagastrodiae_C368-T10_good_125.070
SRR6049665Rhizomagastrodiae_C368-T10_good_125.070
SRP279888GastroGastrodia elata tuber 22.87
JuvenJuvenile tuber28.70
Mother_GastroMother tuber of Gastrodia elata 25.60
Mother_JuvenMother tuber of Juvenile 20.73