Detail information of GWHGAAEX003825/evm.TU.scaffold_14.163


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392404540|ref|YP_006441152.1|5.00E-66AAA ATPase central domain protein [Turneriella parva DSM 21527]
KOGKOG07300AAA+-type ATPase
nrgi|672139971|ref|XP_008793790.1|0PREDICTED: meiotic spindle formation protein mei-1 isoform X1 [Phoenix dactylifera]
Swissprottr|Q9SEI4|PRS6B_ARATH2.00E-3326S protease regulatory subunit 6B homolog
trEMBLtr|K3YR22|K3YR22_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si016716m}
TAIRAT4G041800P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001266168456672156+
Transcript Sequence

Network for GWHGAAEX003825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA3384651.40E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.170
SRR2545915Juvenile tuber8.600
SRP108465SRR5643513five period of Gastrodia elata18.240
SRR5643514five period of Gastrodia elata21.080
SRR5643515five period of Gastrodia elata17.950
SRR5643524five period of Gastrodia elata23.460
SRR5643525five period of Gastrodia elata19.420
SRR5643528five period of Gastrodia elata20.930
SRR5643658five period of Gastrodia elata13.290
SRR5643659five period of Gastrodia elata16.470
SRR5643660five period of Gastrodia elata16.890
SRR5643661five period of Gastrodia elata17.600
SRR5643662five period of Gastrodia elata18.040
SRR5643663five period of Gastrodia elata16.590
SRR5643664five period of Gastrodia elata14.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.000
SRR6049655Rhizomagastrodiae_C368-T10_good_112.590
SRR6049656Rhizomagastrodiae_C368-T07_good_113.610
SRR6049657Rhizomagastrodiae_C368-T07_good_116.400
SRR6049658Rhizomagastrodiae_C368-T04_good_111.280
SRR6049659Rhizomagastrodiae_C368-T04_good_112.840
SRR6049660Rhizomagastrodiae_C368-T01_good_112.250
SRR6049661Rhizomagastrodiae_C368-T04_good_111.890
SRR6049662Rhizomagastrodiae_C368-T01_good_114.720
SRR6049663Rhizomagastrodiae_C368-T01_good_112.640
SRR6049664Rhizomagastrodiae_C368-T10_good_119.080
SRR6049665Rhizomagastrodiae_C368-T10_good_119.080
SRP279888GastroGastrodia elata tuber 18.80
JuvenJuvenile tuber33.79
Mother_GastroMother tuber of Gastrodia elata 17.22
Mother_JuvenMother tuber of Juvenile 25.83