Gene detail

Detail information of GWHGAAEX003826/evm.TU.scaffold_14.164

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|113476868\|ref\|YP_722929.1\|	6.00E-24	hypothetical protein Tery_3354 [Trichodesmium erythraeum IMS101]
nr	gi\|672117726\|ref\|XP_008782054.1\|	4.89E-113	PREDICTED: uncharacterized protein LOC103701675 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0TTA8\|M0TTA8_MUSAM	3.00E-112	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P24550_001}
TAIR	AT5G23040	3.00E-100	Protein of unknown function (DUF3353)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	6672157	6686198	-

Transcript Sequence
>GWHTAAEX003826 GAAAGGCCCAGCCCACTCCAGTGCTGTTCTCAACTTGAAGAGGGGTCTCTAACCTGCATCCTATCTCTCTCGCTCTCTCTCCCGCTCCCAGCCTCGCGAAGAGGCGAAGGATATTGAGAGTTTTGGCTCCAATCCCTGATTTCTTCTATCATGGACTCTCTTTTCCTTGCAAGCCCTGCCAATTTCTCCTCTCGCCTTCTTCTCCGCTCCAAACAGAGCAACCAGAAGGAAGCAAGCACCTCATGCAGGTTGGGGATTAGGAGTACTAGGTGCATGATGGACGTTTCACTTGGCGGAAGCCAAAGTCATGAAAATGTTCTGAAATTTCCTCGAATGCGCATATGGGACCCTTATAAGCGGCTGGGTTTAACTCGGGACGCTTCTGAAGAAGAAGTTTTAGCAGCACGAAATTTCCTTCTTGAACAATATGCCGAACACGAGGGAAGTGTCGAGTCCATTGAAGGTGCTTTTGAAAAGCTGTTAATGGCAAGCTTCAAGCTGCGTAAGAAAACAAAAATCAATCTTAAAAGCAAACTGAAGAAGAAGGTTGATGAATCACCTCCTTGGGTTCAGAGATTGCTGGGTCATGTTGAAATTCCTCCTTTTGGCACAATCCTTAGAAGACTTTTCCTATTTGCTTTTATGGGTGGCTGGAGTATCATGAATTCTGCAGAGACTGGACCTGCCTTCCAAGTGGCACTGTCATTAGGATCCTGCATTTACTTTCTCAATGAAAAGATGAACAATATTCCAAGAGCTTCAATAACAGGATTTGTAGCTCTGGCTTTCGGTTGGATTTTGGGTTCTATTGTGATTCCAATGATTGCCCCTTCAGTTCTGCAGCAGCAGATATGGAGCCTTGAACTGCTTACCTCTTTGGTCTCTTATGGCTTCTTGTTCGCAGCCTGCACTTATCTCAAGTAGTGAATGTTTTCTGCTTTCTATGCTCTCAAGTAGTGTAGCATGAATCCTGATATTCTTATCATCTTTTTATTTTTTTACTTTTGTTGTTGCTGGAAATCATATGGATATGATTGTTATGTTCTGCATATCCAAATCACTCATATTTAATTTTAGGTTATGGTAAGAAAACTAATGGGCATGTTTATACAAGCACTTTTGTAGAGGAAGAGATATACAAGAACAAAATGTCTGATTCATTATTTATATATATGTACTGATTGCATTCAATTTGTTTATTTGGGATTATTGCTGCAGGCAGTAGTTTTCTTAGTATTTATAATGAGATTTTAAATTTAAATCAAAAAAGGAATGGAATGCAACGAGACATTAGAAAAGGATCGAGATCCTTCCAATCTCACATCTAGAAGTTTTGCAGCAACGAGTATAAAAGAAGCGAAGAAGCAGAAGGTTTAGCTAATAAGAGAGAAGATAGGGTGTCGTTGCCAACGATTAACAGGTATCAAACTTGAAATAAATGATTCAGCTCAAATTTAAGCATTATTATGTGGTGAAGCAAATTCATTGAGATGGTTCGTAGTGGGTGTTCAAATTAAAAGCCTATATTATGCATATATAAAGCATAGATAGTCACCAGACTAGTTGCATTAACACATTCATCAAATATAGGAAAAATTCGAGGCACAATTAGTGGATGGC

Network for GWHGAAEX003826

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11833.7	CPP1-like	75	256	7.50E-55

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	103.080
SRP064423	SRR2545915	Juvenile tuber	126.260
SRP108465	SRR5643513	five period of Gastrodia elata	37.320
	SRR5643514	five period of Gastrodia elata	31.880
	SRR5643515	five period of Gastrodia elata	32.930
	SRR5643524	five period of Gastrodia elata	32.620
	SRR5643525	five period of Gastrodia elata	64.400
	SRR5643528	five period of Gastrodia elata	54.950
	SRR5643658	five period of Gastrodia elata	66.570
	SRR5643659	five period of Gastrodia elata	47.340
	SRR5643660	five period of Gastrodia elata	50.410
	SRR5643661	five period of Gastrodia elata	51.080
	SRR5643662	five period of Gastrodia elata	92.080
	SRR5643663	five period of Gastrodia elata	76.260
	SRR5643664	five period of Gastrodia elata	99.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	54.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	43.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	63.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	62.330
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	75.460
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	57.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	65.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	35.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.230
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.230
SRP279888	Gastro	Gastrodia elata tuber	112.58
	Juven	Juvenile tuber	49.72
	Mother_Gastro	Mother tuber of Gastrodia elata	36.93
	Mother_Juven	Mother tuber of Juvenile	42.10