Detail information of GWHGAAEX003839/evm.TU.scaffold_14.185


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695061442|ref|XP_009419153.1|7.47E-109PREDICTED: uncharacterized protein LOC103999204 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|A0A061GTX7|A0A061GTX7_THECC5.00E-102Sequence-specific DNA binding transcription factors {ECO:0000313|EMBL:EOY32612.1}
TAIRAT3G100404.00E-65sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001272364957237568+
Transcript Sequence

Network for GWHGAAEX003839

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4691942.10E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.130
SRR2545915Juvenile tuber41.040
SRP108465SRR5643513five period of Gastrodia elata37.170
SRR5643514five period of Gastrodia elata42.800
SRR5643515five period of Gastrodia elata70.260
SRR5643524five period of Gastrodia elata54.420
SRR5643525five period of Gastrodia elata60.630
SRR5643528five period of Gastrodia elata80.870
SRR5643658five period of Gastrodia elata71.620
SRR5643659five period of Gastrodia elata71.380
SRR5643660five period of Gastrodia elata66.410
SRR5643661five period of Gastrodia elata57.410
SRR5643662five period of Gastrodia elata61.850
SRR5643663five period of Gastrodia elata56.350
SRR5643664five period of Gastrodia elata47.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.220
SRR6049655Rhizomagastrodiae_C368-T10_good_125.160
SRR6049656Rhizomagastrodiae_C368-T07_good_133.680
SRR6049657Rhizomagastrodiae_C368-T07_good_152.600
SRR6049658Rhizomagastrodiae_C368-T04_good_148.350
SRR6049659Rhizomagastrodiae_C368-T04_good_152.520
SRR6049660Rhizomagastrodiae_C368-T01_good_146.670
SRR6049661Rhizomagastrodiae_C368-T04_good_142.200
SRR6049662Rhizomagastrodiae_C368-T01_good_147.270
SRR6049663Rhizomagastrodiae_C368-T01_good_156.220
SRR6049664Rhizomagastrodiae_C368-T10_good_128.190
SRR6049665Rhizomagastrodiae_C368-T10_good_128.190
SRP279888GastroGastrodia elata tuber 39.57
JuvenJuvenile tuber45.96
Mother_GastroMother tuber of Gastrodia elata 94.91
Mother_JuvenMother tuber of Juvenile 88.03