Detail information of GWHGAAEX003847/evm.TU.scaffold_14.196


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743765794|ref|XP_010913124.1|5.80E-115PREDICTED: transcription factor bHLH130-like [Elaeis guineensis]
Swissprottr|Q66GR3|BH130_ARATH3.00E-60Transcription factor bHLH130
trEMBLtr|M0T0Q6|M0T0Q6_MUSAM4.00E-98Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P22310_001}
TAIRAT2G422803.00E-57basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001277013407703013+
Transcript Sequence

Network for GWHGAAEX003847

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH2522978.50E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms102.710
SRR2545915Juvenile tuber49.930
SRP108465SRR5643513five period of Gastrodia elata63.850
SRR5643514five period of Gastrodia elata57.380
SRR5643515five period of Gastrodia elata49.210
SRR5643524five period of Gastrodia elata51.470
SRR5643525five period of Gastrodia elata109.550
SRR5643528five period of Gastrodia elata89.130
SRR5643658five period of Gastrodia elata140.650
SRR5643659five period of Gastrodia elata36.940
SRR5643660five period of Gastrodia elata40.350
SRR5643661five period of Gastrodia elata38.500
SRR5643662five period of Gastrodia elata35.760
SRR5643663five period of Gastrodia elata30.040
SRR5643664five period of Gastrodia elata54.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.190
SRR6049655Rhizomagastrodiae_C368-T10_good_171.420
SRR6049656Rhizomagastrodiae_C368-T07_good_151.350
SRR6049657Rhizomagastrodiae_C368-T07_good_187.280
SRR6049658Rhizomagastrodiae_C368-T04_good_192.820
SRR6049659Rhizomagastrodiae_C368-T04_good_195.360
SRR6049660Rhizomagastrodiae_C368-T01_good_163.370
SRR6049661Rhizomagastrodiae_C368-T04_good_189.820
SRR6049662Rhizomagastrodiae_C368-T01_good_142.930
SRR6049663Rhizomagastrodiae_C368-T01_good_135.120
SRR6049664Rhizomagastrodiae_C368-T10_good_148.660
SRR6049665Rhizomagastrodiae_C368-T10_good_148.660
SRP279888GastroGastrodia elata tuber 49.76
JuvenJuvenile tuber144.60
Mother_GastroMother tuber of Gastrodia elata 218.07
Mother_JuvenMother tuber of Juvenile 175.78