Gene detail

Detail information of GWHGAAEX003865/evm.TU.scaffold_14.233

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|338176051\|ref\|YP_004652861.1\|	4.00E-151	enoyl-ACP reductase [Parachlamydia acanthamoebae UV-7]
KOG	KOG0725	0	Reductases with broad range of substrate specificities
nr	gi\|743808818\|ref\|XP_010928434.1\|	0	PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH] 1, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q9SLA8\|FABI_ARATH	0	Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic (Precursor)
trEMBL	tr\|M0SQ90\|M0SQ90_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P19270_001}
TAIR	AT2G05990	0	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000012	9189057	9202250	+

Transcript Sequence
>GWHTAAEX003865 TTAACCCTAGGGTTTGTCCTTAACGATAATCCTTCCTTCCACTTTATTTAAACATATCCTCGGTTTCATCGGCAAGGATATCGGCATTTTCGAATCTTCTCGTTCAAAGGCTCACAATCGTGTGAATCACCTGAGGACGTGCGGCGACAGGAACGATAAAGGTTTAGTTTCTGAGCTTATCATCTAGGAAATGTCTACCTCATCAACTCCTTGTTTGCAAAAGCTAGCATTATGGAAGTCAACTTCTTCACCGGTGATGCTATTGTCAAGTGCAAAGATGAATTTAAAAGTCACTAATCAAGTTAAATTGTCAAGCTCTTCCTGTATCTCCTTTACCAATCATTTTCACCGAAGCTTTATAAGCACTCCAAAAGCAAGAAGTGTCAGTATAAAGGCTCAATCTGAGAAGAATGACAATAATGTTGTTTCGGGATTGCAAATCGATTTAAGAGGTAAAAGGGCATTTATTGCTGGAATAGCTGATGACAATGGATATGGATGGGCAATCGCCAAGGCTCTTTCTGCAGCAGGTGCAGATATTCTTGTTGGTACATGGGTCCCTGCACTAAACATATTTGAAACAAGCTTAAGACGTGGAAAGTTTGATGAGTCAAGGCGGTTGCCAAACGATTCTCTCATGGAGATTGCCAAGGTTTATCCTCTCGATGCTGTGTTTGACAGTCCTGAGGATGTTCCTGAAGATATTAGGACAAACAAACGTTATGCCGGTACCTCTAACTGGACTGTTAAGGAAGTGGCTGAATCCGTCAAGAATGATTTTGGAAGCATAGACATTCTAGTGCATTCCCTTGCTAACGGTCCAGAGGTCACCAAACCTCTGCTGGAAACTTCTAGGAAGGGGTACCTCGCCGCTATCTCTGCTTCTAGCTATTCGTTTGTTTCTCTGCTCCGGCATTTCCTTCCTATAATGAACTCAGGTGGTGCCACGATCTCTCTCACATATATTGCTTCTGAGAGGACCATTCCCGGATATGGTGGGGGCATGAGTTCGGCCAAAGCAGCACTTGAGAGTGATACCAGGATATTAGCTTATGAAGCAGGAAGGAAGAATCAGATTAGAGTCAACACCATATCAGCAGGTCCGCTGGGGAGCCGCGCTGCAAAGGCCATCGGTTTCATTGAAAAGATGATAGATTACTCGTACGCCAATGCTCCATTGCAGAAAGATCTGCTAGCAGATGAAGTTGGAAATGCAGCAGCTTTCTTGGTGTCACCGTTAGCTTCGGCCATCACAGGTTCAGTGTTATATGTTGATAATGGCCTGCATTCGATGGGTGTGGCCGCCGACAGCTCCTCGTTTTCGACGTGAAAGATATGATGGAAGGAAAAGTCGGTCTCTCCCTTTGGCATTGATATTATTGTTTGCATTATTCAGTGCTTATTTTTGTTGTCTACGTTATGCTTAAATGACATTTGCTAACGATTAGCCGTTTCTTGATTATATGACCATTTATGATCGTTTGATTATTGAATGAGATGCTGGAGATGAGTACTGCTGCTGAAGATATTTTGCGAGCAAATGTA

Network for GWHGAAEX003865

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13561.5	adh_short_C2	184	366	3.90E-50

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00208	fabI	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Biosynthesis of antibiotics	map01130
		Fatty acid metabolism	map01212
		Fatty acid biosynthesis	map00061
		Biotin metabolism	map00780
		Prodigiosin biosynthesis	map00333

Gene Ontology

GO term	Ontology	Name
GO:0006633	Biological Process	fatty acid biosynthetic process
GO:0055114	Biological Process	oxidation-reduction process
GO:0004318	Molecular Function	enoyl-[acyl-carrier-protein] reductase (NADH) activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	52.130
SRP064423	SRR2545915	Juvenile tuber	42.890
SRP108465	SRR5643513	five period of Gastrodia elata	59.930
	SRR5643514	five period of Gastrodia elata	69.720
	SRR5643515	five period of Gastrodia elata	69.190
	SRR5643524	five period of Gastrodia elata	70.060
	SRR5643525	five period of Gastrodia elata	35.470
	SRR5643528	five period of Gastrodia elata	40.500
	SRR5643658	five period of Gastrodia elata	38.460
	SRR5643659	five period of Gastrodia elata	64.780
	SRR5643660	five period of Gastrodia elata	61.150
	SRR5643661	five period of Gastrodia elata	57.330
	SRR5643662	five period of Gastrodia elata	85.080
	SRR5643663	five period of Gastrodia elata	86.030
	SRR5643664	five period of Gastrodia elata	77.730
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	71.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	52.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	70.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	55.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	49.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	34.690
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	58.330
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	74.180
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	45.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	89.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	89.190
SRP279888	Gastro	Gastrodia elata tuber	59.69
	Juven	Juvenile tuber	73.62
	Mother_Gastro	Mother tuber of Gastrodia elata	19.49
	Mother_Juven	Mother tuber of Juvenile	25.43