Detail information of GWHGAAEX003872/evm.TU.scaffold_14.243


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743821703|ref|XP_010932105.1|1.04E-118PREDICTED: putative lysozyme-like protein [Elaeis guineensis]
Swissprottr|Q9S7C9|ESCA_ARATH7.00E-13Putative DNA-binding protein ESCAROLA
trEMBLtr|A0A061FEZ3|A0A061FEZ3_THECC2.00E-115AT hook motif DNA-binding family protein isoform 1 {ECO:0000313|EMBL:EOY15900.1}
TAIRAT2G336204.00E-77AT hook motif DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001297085089714850-
Transcript Sequence

Network for GWHGAAEX003872

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03479.14DUF2961592732.40E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.330
SRR2545915Juvenile tuber19.370
SRP108465SRR5643513five period of Gastrodia elata53.330
SRR5643514five period of Gastrodia elata38.910
SRR5643515five period of Gastrodia elata49.360
SRR5643524five period of Gastrodia elata43.850
SRR5643525five period of Gastrodia elata105.480
SRR5643528five period of Gastrodia elata104.560
SRR5643658five period of Gastrodia elata103.850
SRR5643659five period of Gastrodia elata1.890
SRR5643660five period of Gastrodia elata1.260
SRR5643661five period of Gastrodia elata1.750
SRR5643662five period of Gastrodia elata3.390
SRR5643663five period of Gastrodia elata0.850
SRR5643664five period of Gastrodia elata1.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.550
SRR6049655Rhizomagastrodiae_C368-T10_good_118.580
SRR6049656Rhizomagastrodiae_C368-T07_good_119.640
SRR6049657Rhizomagastrodiae_C368-T07_good_197.450
SRR6049658Rhizomagastrodiae_C368-T04_good_1113.500
SRR6049659Rhizomagastrodiae_C368-T04_good_1189.030
SRR6049660Rhizomagastrodiae_C368-T01_good_168.510
SRR6049661Rhizomagastrodiae_C368-T04_good_195.040
SRR6049662Rhizomagastrodiae_C368-T01_good_121.830
SRR6049663Rhizomagastrodiae_C368-T01_good_132.170
SRR6049664Rhizomagastrodiae_C368-T10_good_116.260
SRR6049665Rhizomagastrodiae_C368-T10_good_116.260
SRP279888GastroGastrodia elata tuber 7.08
JuvenJuvenile tuber6.81
Mother_GastroMother tuber of Gastrodia elata 330.44
Mother_JuvenMother tuber of Juvenile 235.72