Detail information of GWHGAAEX003874/evm.TU.scaffold_140.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00459.00E-12Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily)
nrgi|720005465|ref|XP_010257664.1|1.09E-10PREDICTED: calpain-type cysteine protease DEK1 [Nelumbo nucifera]
Swissprottr|Q8RVL2|DEK1_ARATH3.00E-12Calpain-type cysteine protease DEK1 (Precursor)
trEMBLtr|A0A068VCY9|A0A068VCY9_COFCA7.00E-11Coffea canephora
TAIRAT1G553509.00E-12calpain-type cysteine protease family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001383022054017+
Transcript Sequence

Network for GWHGAAEX003874

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.540
SRR2545915Juvenile tuber1.620
SRP108465SRR5643513five period of Gastrodia elata1.210
SRR5643514five period of Gastrodia elata1.680
SRR5643515five period of Gastrodia elata1.690
SRR5643524five period of Gastrodia elata1.480
SRR5643525five period of Gastrodia elata1.070
SRR5643528five period of Gastrodia elata1.230
SRR5643658five period of Gastrodia elata2.630
SRR5643659five period of Gastrodia elata2.600
SRR5643660five period of Gastrodia elata1.790
SRR5643661five period of Gastrodia elata1.630
SRR5643662five period of Gastrodia elata2.360
SRR5643663five period of Gastrodia elata3.010
SRR5643664five period of Gastrodia elata1.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.460
SRR6049656Rhizomagastrodiae_C368-T07_good_10.340
SRR6049657Rhizomagastrodiae_C368-T07_good_11.210
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.500
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.310
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.680
SRR6049665Rhizomagastrodiae_C368-T10_good_10.680
SRP279888GastroGastrodia elata tuber 0.45
JuvenJuvenile tuber0.70
Mother_GastroMother tuber of Gastrodia elata 0.39
Mother_JuvenMother tuber of Juvenile 0.83