Detail information of GWHGAAEX003883/evm.TU.scaffold_140.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|148655989|ref|YP_001276194.1|9.00E-21ferroxidase [Roseiflexus sp. RS-1]
KOGKOG23323.00E-114Ferritin
nrgi|351723695|ref|NP_001237032.1|1.60E-122ferritin-3, chloroplastic [Glycine max]
Swissprottr|Q948P6|FRI3_SOYBN7.00E-125Ferritin-3, chloroplastic (Precursor)
trEMBLtr|I7DM37|I7DM37_SOYBN4.00E-121Ferritin {ECO:0000256|RuleBase:RU361145}
TAIRAT3G110503.00E-114ferritin 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000138726884735034+
Transcript Sequence

Network for GWHGAAEX003883

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00210.23Ferritin962405.10E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00522FTH1 Ferroptosis map04216
Necroptosismap04217
Mineral absorptionmap04978

Gene Ontology

GO term OntologyName
GO:0006879Biological Processcellular iron ion homeostasis
GO:0008199Molecular Functionferric iron binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms79.050
SRR2545915Juvenile tuber309.710
SRP108465SRR5643513five period of Gastrodia elata250.270
SRR5643514five period of Gastrodia elata566.830
SRR5643515five period of Gastrodia elata428.890
SRR5643524five period of Gastrodia elata489.760
SRR5643525five period of Gastrodia elata83.610
SRR5643528five period of Gastrodia elata113.350
SRR5643658five period of Gastrodia elata47.360
SRR5643659five period of Gastrodia elata244.720
SRR5643660five period of Gastrodia elata475.380
SRR5643661five period of Gastrodia elata268.450
SRR5643662five period of Gastrodia elata297.660
SRR5643663five period of Gastrodia elata249.780
SRR5643664five period of Gastrodia elata325.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1402.680
SRR6049655Rhizomagastrodiae_C368-T10_good_1130.690
SRR6049656Rhizomagastrodiae_C368-T07_good_1237.960
SRR6049657Rhizomagastrodiae_C368-T07_good_1218.930
SRR6049658Rhizomagastrodiae_C368-T04_good_1161.140
SRR6049659Rhizomagastrodiae_C368-T04_good_1135.470
SRR6049660Rhizomagastrodiae_C368-T01_good_1106.360
SRR6049661Rhizomagastrodiae_C368-T04_good_1159.460
SRR6049662Rhizomagastrodiae_C368-T01_good_1324.240
SRR6049663Rhizomagastrodiae_C368-T01_good_1135.260
SRR6049664Rhizomagastrodiae_C368-T10_good_1188.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1188.360
SRP279888GastroGastrodia elata tuber 368.33
JuvenJuvenile tuber70.34
Mother_GastroMother tuber of Gastrodia elata 353.40
Mother_JuvenMother tuber of Juvenile 341.93