Gene detail

Detail information of GWHGAAEX003889/evm.TU.scaffold_140.26

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|310818411\|ref\|YP_003950769.1\|	4.00E-65	cation transporter/universal stress family protein [Stigmatella aurantiaca DW4/3-1]
KOG	KOG1650	0	Predicted K+/H+-antiporter
nr	gi\|641831691\|gb\|KDO50743.1\|	0	hypothetical protein CISIN_1g043446mg, partial [Citrus sinensis]
Swissprot	tr\|Q9SIT5\|CHX15_ARATH	0	Cation/H(+) antiporter 15
trEMBL	tr\|A0A067E6S5\|A0A067E6S5_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO50743.1} (Fragment)
TAIR	AT2G13620	0	cation/hydrogen exchanger 15

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000138	1347634	1352358	+

Transcript Sequence
>GWHTAAEX003889 ATGAATTCCTCTCCGATCCAATTCCTGGACGATGAAATGCCCGGCAGAAACAGAAGCGATACCCCTCTTATATGCTACGCTTCAACCATGATGTCGAAGAGCGGAGTGCTGCAGTACGAGAATCCCTTGGAATTCACCTTCCCTCTCTTCCTCCTGCAACTTCTCGTCATCCTCCTCACCAGCCGCGTCACTGCTGCTATCCTCAAGCCGTTGCGCCAACCCCGCTACATTTCGGAGTTTCTGGGAGGTTTCATTCTGGGTCCCACCATCATGGGGAGGATACCGAATTTTTTCGTAACCTTCTTCCCGTACCGAAGCCTGGTTGTGATTGAATCAGTGGCCTCCATCGGGCTTGTCTTCTTCATGTTCATCGTGGGCATCGAGATCGACCCAGACGTTGTCCGGCGTGTCGCCCGGCGCTCCGCCTTTCTCACCTTTCTGGTCCTCATCGGCTCTGTCGTCATTGCCGTGATTGCAGGCTTCACGCTGCACAGCAGCATCCAAGACAGGACCAACCGCGGGGCCTTCGTGATGTTCTTCTGCGGCATTTTCAGCGTCACCTCCTTCTCGGTGCTTGCCGGCATCCTGGCTGACCTGAAGCTGATGGCTTCTGAGATCGGCCGGCTTGCTCTGTCCTCAGCCATGATGTTGAACGGGGTGGCGTGGACTCTCCTGGTTTTCTCTACCGCATTGGTGCAGAGCAAAGGAAGGATGATGCCAGCTGCAATGTCGGTGATCTCCGGCGGGCTATTCAGCGTTGTGGTGTACATGGTTGTGAGGAGGGCGGCGAGGTGGGTGCAGAAGAGGACGCCGGAGGGAGAGGAAGTGGCGGAGCACCACGTTTGCATGATTTTGGCAGGGGCGATGGCCGCCGCTTTTGCTGCCGATGCCATTGGGACCCACGCCATATTCGGGGCTTTTGTTTACGGACTCGCAGTGCCCAACGGGCCCCTTGGCGAGCTTCTCATTGACAAGATTGGGCATTTCATTGAGGGTCTGCTTCTCCCGATTTTCTTCGCCATTAGTGGATTCAGGACTGATCTCTACGTCATAGTGGACGCTTACTCCGCGTGGTTGCTGCTCTCGGTGGTCGTCGCCGCGGTAATCAGTAAGGTCGCTGGCGCCGTGATTGCGGCTTTGCTCATGGAGATGCCGTTGCAAGACGGGGCCTCCTTGGGACTGTTGCTCAATACTAAAGGGGCTATTGAACTCATCATGCTCAATATTGGTTGGGATAAGATGGTGCTGCGCGACCAATCGTTCACAATTTTGGCGGTTTTGTCGGTGGTGGTGACGGCAATAGTGACACCTCTGGCAAACGTGGTGGCGAAGCCTTCGAGGCAGATGGTCGCTTACAAACGGCGCACGATTCGGTGGAGGGATGAGGAATCAGAGTTCCGAGTTCTGGTGTGCGCCCACTCGTCTCGTGAGGTGCCCTCGCTGATCGCTCTCCTGGACATCTCCCACCCGACGAAACGCTCCCCTTTCTTCGTCTACGCCCTGTACCTCGCCGAGCTCACCGGCCGCGCTTCCACCCTGTTCGTTGTCAACACCAACAAGTCATCCCCCGGTTACATCCGGAGCCAGACCCAATCCGACCACATTGCACAAGCCTTCGAATCCTACGAGCAGCACGCTGGCGGGGTATCTGTTCAGTCCCTCACCGCCTTCTCCCAGTACTGCTCCATGCACCGGGATGTCATCACGCTGTCAGAGGAGAGGCACTGCGCCTTGGTGCTCCTCCCGTTCCATAAGCGCCAGACCATCGGCGGTGCAATGGAAGTCACCCACCCCGGCATCCGTTCCCTCAACCAGAACGTTCTGGCCGGCTCGCCCTGTTCCGTTGGAATACTCGTGGACCGCGGCTTGGCTGGCACCGGAGCTGGGCCACGCGGGCAGCGGCGCCCTGTCGCTCTCCTCTTCTTCGGGGGACCCGATGATCGCGAGGCGCTGGCCTACGCAGAGCGGCTGGCCACCCACACCGGCGTCGCCCTCACCATCGTGCGCTTCCTCTTCTGCATTGGGATCGGGGACTCTCTGCCTCCGGCGCGGGTGCTCAATGTGGCCGGAGAGAGCGACGAGGAGTGCTTGGCGCAGTTTCGGGCAGGGGCTGGGGCTGAGGCAGAGTACGTGCAGAGGATGGTTGAGAATGCGGAGGAGACGGTGGCTCTCTTGCGAGAAATGGACGGATCCTATGATCTGTATATTGTGGGGAGTGGGGCAGCGATGACGTCCCCACTCACCGTAGGGATGGCTGATTGGACTGAATGCCAGGAGCTTGGCCCCATTGGGGATTTGCTTGCATCCTCCGATTTTGGGTCCAAGGCCTCCGTCCTCGTGATTCAGAGGGGAAAGAACTTGCCAGAATCAATAACGCCAATTCCGGTCAGTCCTCGGATGAGGGTATAAATAGGCCGCCATGAATCATTGAACACAGAAACGAGCGGTCATAGTTTCACCCTCC

Network for GWHGAAEX003889

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00999.20	Na_H_Exchanger	56	438	5.20E-42

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055085	Biological Process	transmembrane transport
GO:0006812	Biological Process	cation transport
GO:0015299	Molecular Function	solute:proton antiporter activity
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.120
SRP064423	SRR2545915	Juvenile tuber	0.070
SRP108465	SRR5643513	five period of Gastrodia elata	0.220
	SRR5643514	five period of Gastrodia elata	0.020
	SRR5643515	five period of Gastrodia elata	0.060
	SRR5643524	five period of Gastrodia elata	0.030
	SRR5643525	five period of Gastrodia elata	0.540
	SRR5643528	five period of Gastrodia elata	0.310
	SRR5643658	five period of Gastrodia elata	0.470
	SRR5643659	five period of Gastrodia elata	0.100
	SRR5643660	five period of Gastrodia elata	0.110
	SRR5643661	five period of Gastrodia elata	0.170
	SRR5643662	five period of Gastrodia elata	0.500
	SRR5643663	five period of Gastrodia elata	0.380
	SRR5643664	five period of Gastrodia elata	0.850
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.030
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.260
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.340
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.100
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.050
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.050
SRP279888	Gastro	Gastrodia elata tuber	0.27
	Juven	Juvenile tuber	0.01
	Mother_Gastro	Mother tuber of Gastrodia elata	1.04
	Mother_Juven	Mother tuber of Juvenile	0.06