Detail information of GWHGAAEX003890/evm.TU.scaffold_140.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|154253660|ref|YP_001414484.1|0NADH dehydrogenase I subunit F [Parvibaculum lavamentivorans DS-1]
KOGKOG26580NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit
nrgi|743890758|ref|XP_010911159.1|0PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Elaeis guineensis]
Swissprottr|Q9FNN5|NDUV1_ARATH0NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Precursor)
trEMBLtr|B9HTA1|B9HTA1_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEF01793.1}
TAIRAT5G08530051 kDa subunit of complex I

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013814833951517196+
Transcript Sequence

Network for GWHGAAEX003890

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01512.16Complex1_51K1142831.00E-45
PF10531.8SLBB3103592.30E-07
PF10589.8NADH_4Fe-4S4004822.60E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03942NDUFV1 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activity
GO:0051287Molecular FunctionNAD binding
GO:0051539Molecular Function4 iron, 4 sulfur cluster binding
GO:0010181Molecular FunctionFMN binding
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)H

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.750
SRR2545915Juvenile tuber55.570
SRP108465SRR5643513five period of Gastrodia elata92.360
SRR5643514five period of Gastrodia elata114.360
SRR5643515five period of Gastrodia elata95.190
SRR5643524five period of Gastrodia elata107.840
SRR5643525five period of Gastrodia elata91.450
SRR5643528five period of Gastrodia elata117.730
SRR5643658five period of Gastrodia elata94.240
SRR5643659five period of Gastrodia elata69.760
SRR5643660five period of Gastrodia elata65.840
SRR5643661five period of Gastrodia elata61.400
SRR5643662five period of Gastrodia elata65.140
SRR5643663five period of Gastrodia elata65.310
SRR5643664five period of Gastrodia elata63.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.460
SRR6049656Rhizomagastrodiae_C368-T07_good_1107.160
SRR6049657Rhizomagastrodiae_C368-T07_good_194.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1102.520
SRR6049659Rhizomagastrodiae_C368-T04_good_1108.080
SRR6049660Rhizomagastrodiae_C368-T01_good_1100.470
SRR6049661Rhizomagastrodiae_C368-T04_good_194.570
SRR6049662Rhizomagastrodiae_C368-T01_good_1124.980
SRR6049663Rhizomagastrodiae_C368-T01_good_1120.370
SRR6049664Rhizomagastrodiae_C368-T10_good_1132.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1132.250
SRP279888GastroGastrodia elata tuber 55.77
JuvenJuvenile tuber69.82
Mother_GastroMother tuber of Gastrodia elata 90.96
Mother_JuvenMother tuber of Juvenile 81.65