Detail information of GWHGAAEX003892/evm.TU.scaffold_140.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672160056|ref|XP_008799798.1|0PREDICTED: protein trichome birefringence-like 33 [Phoenix dactylifera]
Swissprottr|F4IH21|TBL33_ARATH0Protein trichome birefringence-like 33
trEMBLtr|M0UB18|M0UB18_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP21100_001}
TAIRAT2G403200TRICHOME BIREFRINGENCE-LIKE 33

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013818043041816199+
Transcript Sequence

Network for GWHGAAEX003892

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N901426.20E-20
PF13839.5PC-Esterase1434291.20E-91
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.900
SRR2545915Juvenile tuber17.620
SRP108465SRR5643513five period of Gastrodia elata16.770
SRR5643514five period of Gastrodia elata16.460
SRR5643515five period of Gastrodia elata17.440
SRR5643524five period of Gastrodia elata16.280
SRR5643525five period of Gastrodia elata25.470
SRR5643528five period of Gastrodia elata20.330
SRR5643658five period of Gastrodia elata31.310
SRR5643659five period of Gastrodia elata16.520
SRR5643660five period of Gastrodia elata13.520
SRR5643661five period of Gastrodia elata13.680
SRR5643662five period of Gastrodia elata13.830
SRR5643663five period of Gastrodia elata13.210
SRR5643664five period of Gastrodia elata13.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.480
SRR6049655Rhizomagastrodiae_C368-T10_good_118.750
SRR6049656Rhizomagastrodiae_C368-T07_good_115.100
SRR6049657Rhizomagastrodiae_C368-T07_good_117.660
SRR6049658Rhizomagastrodiae_C368-T04_good_111.590
SRR6049659Rhizomagastrodiae_C368-T04_good_111.810
SRR6049660Rhizomagastrodiae_C368-T01_good_113.300
SRR6049661Rhizomagastrodiae_C368-T04_good_110.440
SRR6049662Rhizomagastrodiae_C368-T01_good_110.330
SRR6049663Rhizomagastrodiae_C368-T01_good_18.420
SRR6049664Rhizomagastrodiae_C368-T10_good_113.310
SRR6049665Rhizomagastrodiae_C368-T10_good_113.310
SRP279888GastroGastrodia elata tuber 9.76
JuvenJuvenile tuber17.54
Mother_GastroMother tuber of Gastrodia elata 14.41
Mother_JuvenMother tuber of Juvenile 16.21