Detail information of GWHGAAEX003893/evm.TU.scaffold_140.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31424.00E-86Prenylated rab acceptor 1
nrgi|672136956|ref|XP_008792185.1|7.27E-95PREDICTED: PRA1 family protein B3-like [Phoenix dactylifera]
Swissprottr|O80915|PR1B4_ARATH1.00E-86PRA1 family protein B4
trEMBLtr|V4MBL2|V4MBL2_EUTSA3.00E-88Uncharacterized protein {ECO:0000313|EMBL:ESQ52502.1}
TAIRAT2G383604.00E-86prenylated RAB acceptor 1.B4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013819756671990084+
Transcript Sequence

Network for GWHGAAEX003893

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03208.18PRA1551974.40E-48
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.620
SRR2545915Juvenile tuber36.870
SRP108465SRR5643513five period of Gastrodia elata75.270
SRR5643514five period of Gastrodia elata60.010
SRR5643515five period of Gastrodia elata75.350
SRR5643524five period of Gastrodia elata62.070
SRR5643525five period of Gastrodia elata129.740
SRR5643528five period of Gastrodia elata142.910
SRR5643658five period of Gastrodia elata123.510
SRR5643659five period of Gastrodia elata84.570
SRR5643660five period of Gastrodia elata82.220
SRR5643661five period of Gastrodia elata97.010
SRR5643662five period of Gastrodia elata110.440
SRR5643663five period of Gastrodia elata85.610
SRR5643664five period of Gastrodia elata92.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_173.130
SRR6049655Rhizomagastrodiae_C368-T10_good_1144.560
SRR6049656Rhizomagastrodiae_C368-T07_good_177.960
SRR6049657Rhizomagastrodiae_C368-T07_good_170.730
SRR6049658Rhizomagastrodiae_C368-T04_good_167.930
SRR6049659Rhizomagastrodiae_C368-T04_good_167.090
SRR6049660Rhizomagastrodiae_C368-T01_good_169.470
SRR6049661Rhizomagastrodiae_C368-T04_good_169.300
SRR6049662Rhizomagastrodiae_C368-T01_good_180.460
SRR6049663Rhizomagastrodiae_C368-T01_good_172.190
SRR6049664Rhizomagastrodiae_C368-T10_good_187.130
SRR6049665Rhizomagastrodiae_C368-T10_good_187.130
SRP279888GastroGastrodia elata tuber 76.60
JuvenJuvenile tuber77.37
Mother_GastroMother tuber of Gastrodia elata 89.10
Mother_JuvenMother tuber of Juvenile 93.71