Detail information of GWHGAAEX003899/evm.TU.scaffold_140.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|6.00E-28serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|472178206|gb|AGI21022.1|0calcium-dependent protein kinase 2 [Dendrobium catenatum]
Swissprottr|Q8W4I7|CDPKD_ARATH0Calcium-dependent protein kinase 13
trEMBLtr|W8CMP0|W8CMP0_9ASPA0Calcium-dependent protein kinase 2 {ECO:0000313|EMBL:AGI21022.1}
TAIRAT3G518500calcium-dependent protein kinase 13

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013823704702415301+
Transcript Sequence

Network for GWHGAAEX003899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase563144.50E-73
PF13499.5EF-hand_73604202.20E-09
PF13499.5EF-hand_74324959.80E-14
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.350
SRR2545915Juvenile tuber34.090
SRP108465SRR5643513five period of Gastrodia elata43.280
SRR5643514five period of Gastrodia elata38.240
SRR5643515five period of Gastrodia elata39.300
SRR5643524five period of Gastrodia elata37.110
SRR5643525five period of Gastrodia elata47.740
SRR5643528five period of Gastrodia elata52.970
SRR5643658five period of Gastrodia elata51.720
SRR5643659five period of Gastrodia elata38.680
SRR5643660five period of Gastrodia elata38.990
SRR5643661five period of Gastrodia elata41.040
SRR5643662five period of Gastrodia elata31.690
SRR5643663five period of Gastrodia elata32.560
SRR5643664five period of Gastrodia elata35.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.840
SRR6049655Rhizomagastrodiae_C368-T10_good_128.430
SRR6049656Rhizomagastrodiae_C368-T07_good_136.380
SRR6049657Rhizomagastrodiae_C368-T07_good_145.830
SRR6049658Rhizomagastrodiae_C368-T04_good_136.300
SRR6049659Rhizomagastrodiae_C368-T04_good_141.380
SRR6049660Rhizomagastrodiae_C368-T01_good_141.650
SRR6049661Rhizomagastrodiae_C368-T04_good_137.900
SRR6049662Rhizomagastrodiae_C368-T01_good_134.090
SRR6049663Rhizomagastrodiae_C368-T01_good_134.920
SRR6049664Rhizomagastrodiae_C368-T10_good_134.370
SRR6049665Rhizomagastrodiae_C368-T10_good_134.370
SRP279888GastroGastrodia elata tuber 40.56
JuvenJuvenile tuber60.72
Mother_GastroMother tuber of Gastrodia elata 34.43
Mother_JuvenMother tuber of Juvenile 38.97